Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RFC4P35249 GNG5P2-201ENST00000372054 207 ntBASIC6.53□□□□□ -1.36
RFC4P35249 RPS26P38-201ENST00000414476 348 ntBASIC6.53□□□□□ -1.36
RFC4P35249 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 AC092651.1-201ENST00000426110 312 ntBASIC6.53□□□□□ -1.36
RFC4P35249 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
RFC4P35249 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.53□□□□□ -1.36
RFC4P35249 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.53□□□□□ -1.36
RFC4P35249 LINC02210-201ENST00000444561 288 ntBASIC6.53□□□□□ -1.36
RFC4P35249 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.53□□□□□ -1.36
RFC4P35249 AC006967.1-201ENST00000467608 589 ntBASIC6.53□□□□□ -1.36
RFC4P35249 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.53□□□□□ -1.36
RFC4P35249 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.53□□□□□ -1.36
RFC4P35249 RN7SKP248-201ENST00000516278 305 ntBASIC6.53□□□□□ -1.36
RFC4P35249 RNA5SP43-201ENST00000516559 110 ntBASIC6.53□□□□□ -1.36
RFC4P35249 NMNAT1P1-201ENST00000554095 876 ntBASIC6.53□□□□□ -1.36
RFC4P35249 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.53□□□□□ -1.36
RFC4P35249 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RFC4P35249 AC008814.1-201ENST00000603797 406 ntBASIC6.53□□□□□ -1.36
RFC4P35249 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.53□□□□□ -1.36
RFC4P35249 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.53□□□□□ -1.36
RFC4P35249 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.53□□□□□ -1.36
RFC4P35249 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.52□□□□□ -1.37
RFC4P35249 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.52□□□□□ -1.37
RFC4P35249 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.52□□□□□ -1.37
RFC4P35249 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RFC4P35249 RPL10P10-201ENST00000403509 664 ntBASIC6.52□□□□□ -1.37
RFC4P35249 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.52□□□□□ -1.37
RFC4P35249 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.52□□□□□ -1.37
RFC4P35249 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.52□□□□□ -1.37
RFC4P35249 AC073465.2-201ENST00000440938 498 ntBASIC6.52□□□□□ -1.37
RFC4P35249 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RFC4P35249 GAPDHP56-201ENST00000506031 988 ntBASIC6.52□□□□□ -1.37
RFC4P35249 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RFC4P35249 AC091912.1-201ENST00000511351 248 ntBASIC6.52□□□□□ -1.37
RFC4P35249 IGKV1-32-201ENST00000519290 311 ntBASIC6.52□□□□□ -1.37
RFC4P35249 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.52□□□□□ -1.37
RFC4P35249 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.52□□□□□ -1.37
RFC4P35249 NPM1P42-201ENST00000560329 862 ntBASIC6.52□□□□□ -1.37
RFC4P35249 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.52□□□□□ -1.37
RFC4P35249 MIR4284-201ENST00000578924 81 ntBASIC6.52□□□□□ -1.37
RFC4P35249 AL391358.1-201ENST00000605342 190 ntBASIC6.52□□□□□ -1.37
RFC4P35249 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.52□□□□□ -1.37
RFC4P35249 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.52□□□□□ -1.37
RFC4P35249 AC009120.7-201ENST00000623452 780 ntBASIC6.52□□□□□ -1.37
RFC4P35249 MTCO1P1-201ENST00000624263 1081 ntBASIC6.52□□□□□ -1.37
RFC4P35249 AC099654.6-201ENST00000636487 512 ntBASIC6.52□□□□□ -1.37
RFC4P35249 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
RFC4P35249 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.52□□□□□ -1.37
RFC4P35249 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.52□□□□□ -1.37
RFC4P35249 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFC4P35249 AL359715.3-201ENST00000569267 2123 ntBASIC6.52□□□□□ -1.37
RFC4P35249 OR4G1P-202ENST00000641173 1788 ntBASIC6.52□□□□□ -1.37
RFC4P35249 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
RFC4P35249 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.51□□□□□ -1.37
RFC4P35249 AC073365.1-203ENST00000641055 1992 ntBASIC6.51□□□□□ -1.37
RFC4P35249 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFC4P35249 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
RFC4P35249 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RFC4P35249 RNA5SP113-201ENST00000410486 84 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.51□□□□□ -1.37
RFC4P35249 AC007559.1-201ENST00000428736 355 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.51□□□□□ -1.37
RFC4P35249 AL161722.2-201ENST00000434731 981 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AL161722.1-201ENST00000446972 1032 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.51□□□□□ -1.37
RFC4P35249 STRADBP1-201ENST00000478954 1281 ntBASIC6.51□□□□□ -1.37
RFC4P35249 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFC4P35249 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.51□□□□□ -1.37
RFC4P35249 AC006427.1-201ENST00000514359 712 ntBASIC6.51□□□□□ -1.37
RFC4P35249 IGKV2D-10-201ENST00000520194 281 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AC034205.1-201ENST00000520621 638 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.51□□□□□ -1.37
RFC4P35249 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.51□□□□□ -1.37
RFC4P35249 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFC4P35249 RPL26P30-202ENST00000602923 645 ntBASIC6.51□□□□□ -1.37
RFC4P35249 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.51□□□□□ -1.37
RFC4P35249 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.51□□□□□ -1.37
RFC4P35249 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFC4P35249 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RFC4P35249 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RFC4P35249 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms