Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PRPF38AP1-201ENST00000451976 933 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 AC098976.1-201ENST00000513014 541 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 RNA5SP392-201ENST00000516905 112 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC8.06□□□□□ -1.12
CLIP1P30622 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 MAPK10-304ENST00000641341 3984 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 NLRP3P1-201ENST00000622303 1785 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 SMG1P7-201ENST00000565246 2704 ntBASIC8.06□□□□□ -1.12
CLIP1P30622 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CLIP1P30622 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP1P30622 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
CLIP1P30622 GAPDHP15-201ENST00000398586 975 ntBASIC8.05□□□□□ -1.12
CLIP1P30622 RN7SL346P-201ENST00000491561 294 ntBASIC8.05□□□□□ -1.12
CLIP1P30622 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.05□□□□□ -1.12
CLIP1P30622 RN7SL441P-201ENST00000492388 296 ntBASIC8.05□□□□□ -1.12
CLIP1P30622 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP1P30622 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP1P30622 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.05□□□□□ -1.12
CLIP1P30622 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP1P30622 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP1P30622 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC8.05□□□□□ -1.12
CLIP1P30622 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP1P30622 TEK-205ENST00000615002 4666 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP1P30622 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP1P30622 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CLIP1P30622 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP1P30622 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 AL137845.2-201ENST00000444292 988 ntBASIC8.04□□□□□ -1.12
CLIP1P30622 AC008897.1-201ENST00000494006 347 ntBASIC8.04□□□□□ -1.12
CLIP1P30622 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP1P30622 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 AC016559.2-201ENST00000510759 359 ntBASIC8.04□□□□□ -1.12
CLIP1P30622 AP003080.1-202ENST00000526526 915 ntBASIC8.04□□□□□ -1.12
CLIP1P30622 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP1P30622 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 AC010435.1-201ENST00000623353 1177 ntBASIC8.04□□□□□ -1.12
CLIP1P30622 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP1P30622 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP1P30622 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP1P30622 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
CLIP1P30622 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP1P30622 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP1P30622 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP1P30622 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP1P30622 AC019050.1-201ENST00000418508 492 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 AC092017.2-201ENST00000427600 362 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP1P30622 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP1P30622 TPT1P13-201ENST00000449760 499 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 AL513533.1-201ENST00000453728 415 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP1P30622 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP1P30622 AC018552.1-201ENST00000562099 811 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.03□□□□□ -1.12
CLIP1P30622 UBE2FP2-201ENST00000566646 462 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 MIR4270-201ENST00000581799 70 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC8.03□□□□□ -1.12
CLIP1P30622 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CLIP1P30622 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP1P30622 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CLIP1P30622 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP1P30622 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP1P30622 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.03□□□□□ -1.12
CLIP1P30622 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC8.03□□□□□ -1.12
CLIP1P30622 AC079075.1-201ENST00000559543 878 ntBASIC8.03□□□□□ -1.12
CLIP1P30622 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP1P30622 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC8.03□□□□□ -1.12
CLIP1P30622 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.03□□□□□ -1.12
CLIP1P30622 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.03□□□□□ -1.12
CLIP1P30622 AL133406.3-201ENST00000606817 541 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms