Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.69□□□□□ -1.5
CD40P25942 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CD40P25942 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.69□□□□□ -1.5
CD40P25942 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.69□□□□□ -1.5
CD40P25942 AC004805.3-201ENST00000603178 310 ntBASIC5.69□□□□□ -1.5
CD40P25942 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.69□□□□□ -1.5
CD40P25942 AP004247.3-201ENST00000608682 624 ntBASIC5.69□□□□□ -1.5
CD40P25942 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.69□□□□□ -1.5
CD40P25942 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.69□□□□□ -1.5
CD40P25942 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.69□□□□□ -1.5
CD40P25942 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.69□□□□□ -1.5
CD40P25942 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.69□□□□□ -1.5
CD40P25942 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.69□□□□□ -1.5
CD40P25942 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CD40P25942 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.69□□□□□ -1.5
CD40P25942 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 RN7SKP171-201ENST00000364417 303 ntBASIC5.68□□□□□ -1.5
CD40P25942 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 Y_RNA.559-201ENST00000384686 107 ntBASIC5.68□□□□□ -1.5
CD40P25942 RNU6-1300P-201ENST00000391046 108 ntBASIC5.68□□□□□ -1.5
CD40P25942 RNU6-192P-201ENST00000391253 100 ntBASIC5.68□□□□□ -1.5
CD40P25942 PSMA6P1-201ENST00000400275 741 ntBASIC5.68□□□□□ -1.5
CD40P25942 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 AL450992.3-201ENST00000413192 568 ntBASIC5.68□□□□□ -1.5
CD40P25942 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 RPL24P2-201ENST00000421023 475 ntBASIC5.68□□□□□ -1.5
CD40P25942 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 RPS24P8-201ENST00000431490 402 ntBASIC5.68□□□□□ -1.5
CD40P25942 AL353706.1-201ENST00000436728 494 ntBASIC5.68□□□□□ -1.5
CD40P25942 AL031663.1-201ENST00000437445 219 ntBASIC5.68□□□□□ -1.5
CD40P25942 ARMC4P1-201ENST00000438905 707 ntBASIC5.68□□□□□ -1.5
CD40P25942 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 TIMM8BP2-201ENST00000445940 251 ntBASIC5.68□□□□□ -1.5
CD40P25942 NDUFA12P1-201ENST00000455914 406 ntBASIC5.68□□□□□ -1.5
CD40P25942 RPL23AP12-201ENST00000467573 473 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 RPL23AP71-201ENST00000470966 469 ntBASIC5.68□□□□□ -1.5
CD40P25942 RPS27P20-201ENST00000492051 246 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 AL117351.2-201ENST00000513571 157 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 RN7SKP31-201ENST00000516354 278 ntBASIC5.68□□□□□ -1.5
CD40P25942 Y_RNA.695-201ENST00000516715 107 ntBASIC5.68□□□□□ -1.5
CD40P25942 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.68□□□□□ -1.5
CD40P25942 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CD40P25942 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 AC135983.3-201ENST00000528049 1226 ntBASIC5.68□□□□□ -1.5
CD40P25942 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CD40P25942 AC024405.1-201ENST00000532521 1042 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC092851.1-201ENST00000535964 478 ntBASIC5.68□□□□□ -1.5
CD40P25942 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC5.68□□□□□ -1.5
CD40P25942 AL391156.1-201ENST00000554965 554 ntBASIC5.68□□□□□ -1.5
CD40P25942 HNRNPCP1-201ENST00000556181 766 ntBASIC5.68□□□□□ -1.5
CD40P25942 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.68□□□□□ -1.5
CD40P25942 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 AC122134.1-201ENST00000565664 1104 ntBASIC5.68□□□□□ -1.5
CD40P25942 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.68□□□□□ -1.5
CD40P25942 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.68□□□□□ -1.5
CD40P25942 RN7SL230P-201ENST00000580835 303 ntBASIC5.68□□□□□ -1.5
CD40P25942 AL589765.6-201ENST00000601909 549 ntBASIC5.68□□□□□ -1.5
CD40P25942 DEFB131E-202ENST00000602581 683 ntBASIC5.68□□□□□ -1.5
CD40P25942 NTAN1P1-201ENST00000603150 646 ntBASIC5.68□□□□□ -1.5
CD40P25942 AL137072.1-201ENST00000603444 466 ntBASIC5.68□□□□□ -1.5
CD40P25942 uc_338.29-201ENST00000615099 168 ntBASIC5.68□□□□□ -1.5
CD40P25942 OR1N1-202ENST00000619659 939 ntBASIC5.68□□□□□ -1.5
CD40P25942 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms