Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COL8A2P25067 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 RNA5SP455-201ENST00000365190 119 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 SNORA5.1-201ENST00000384275 131 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 NUDT19P3-201ENST00000404698 555 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.38□□□□□ -1.71
COL8A2P25067 RBMY2QP-201ENST00000429799 1147 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.38□□□□□ -1.71
COL8A2P25067 AL645937.3-201ENST00000453647 936 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 snoU13.20-201ENST00000459180 104 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 AC108161.1-201ENST00000461060 402 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 RPL7P41-201ENST00000485823 957 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 AC231760.1-201ENST00000498002 260 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 AP006245.2-201ENST00000522004 300 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 AC013701.1-201ENST00000522657 465 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.38□□□□□ -1.71
COL8A2P25067 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.38□□□□□ -1.71
COL8A2P25067 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 AC020763.5-201ENST00000623298 430 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COL8A2P25067 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 THAP12P4-201ENST00000528321 2266 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COL8A2P25067 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL8A2P25067 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.38□□□□□ -1.71
COL8A2P25067 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.38□□□□□ -1.71
COL8A2P25067 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 AL078595.2-201ENST00000605309 1780 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 CDY3P-201ENST00000454543 1618 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL8A2P25067 SNURFL-201ENST00000309296 343 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.37□□□□□ -1.71
COL8A2P25067 MIR550A3-201ENST00000390735 95 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 CHMP1B2P-201ENST00000399581 597 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 GJA6P-201ENST00000415117 1042 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.37□□□□□ -1.71
COL8A2P25067 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A2P25067 AC124944.2-201ENST00000429866 1242 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.37□□□□□ -1.71
COL8A2P25067 AL161722.2-201ENST00000434731 981 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 VN1R54P-201ENST00000435210 1049 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 PA2G4P6-201ENST00000438325 1197 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.37□□□□□ -1.71
COL8A2P25067 NOP56P2-201ENST00000447491 769 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 TAAR4P-201ENST00000454843 1039 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A2P25067 RN7SL189P-201ENST00000468631 289 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.37□□□□□ -1.71
COL8A2P25067 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 AC006427.1-201ENST00000514359 712 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC022360.1-201ENST00000521058 340 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC092709.1-201ENST00000521355 1045 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC090286.3-201ENST00000573133 187 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 MIR4436B2-201ENST00000581415 91 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 MIR4436B1-201ENST00000583272 91 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A2P25067 AC011626.1-201ENST00000604710 562 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC093799.2-201ENST00000610062 578 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 EIF3FP1-201ENST00000613970 806 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 AC016542.2-201ENST00000624201 619 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL8A2P25067 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A2P25067 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A2P25067 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.37□□□□□ -1.71
COL8A2P25067 SCARNA15-201ENST00000607520 4325 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.37□□□□□ -1.71
COL8A2P25067 AC006484.1-201ENST00000435086 1884 ntBASIC4.37□□□□□ -1.71
COL8A2P25067 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
COL8A2P25067 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.37□□□□□ -1.71
COL8A2P25067 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL8A2P25067 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
COL8A2P25067 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL8A2P25067 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC112255.1-201ENST00000624070 2493 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms