Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH3P22223 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH3P22223 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
CDH3P22223 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH3P22223 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH3P22223 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH3P22223 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH3P22223 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH3P22223 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 MIR551A-201ENST00000385042 96 ntBASIC5.39□□□□□ -1.55
CDH3P22223 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.39□□□□□ -1.55
CDH3P22223 RN7SKP59-201ENST00000410520 314 ntBASIC5.39□□□□□ -1.55
CDH3P22223 NPM1P40-201ENST00000412758 733 ntBASIC5.39□□□□□ -1.55
CDH3P22223 HYALP1-201ENST00000417674 1279 ntBASIC5.39□□□□□ -1.55
CDH3P22223 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.39□□□□□ -1.55
CDH3P22223 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH3P22223 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH3P22223 AC100832.1-201ENST00000471945 383 ntBASIC5.39□□□□□ -1.55
CDH3P22223 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 AC108693.1-201ENST00000496068 432 ntBASIC5.39□□□□□ -1.55
CDH3P22223 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 BX510359.5-201ENST00000515651 304 ntBASIC5.39□□□□□ -1.55
CDH3P22223 IGLV3-24-201ENST00000517477 197 ntBASIC5.39□□□□□ -1.55
CDH3P22223 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH3P22223 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 MIR8080-201ENST00000622224 89 ntBASIC5.39□□□□□ -1.55
CDH3P22223 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH3P22223 AC132068.1-201ENST00000623805 459 ntBASIC5.39□□□□□ -1.55
CDH3P22223 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 AL078621.3-201ENST00000623707 2042 ntBASIC5.39□□□□□ -1.55
CDH3P22223 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 AC022417.1-201ENST00000624768 1303 ntBASIC5.39□□□□□ -1.55
CDH3P22223 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH3P22223 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CDH3P22223 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH3P22223 AC073136.1-201ENST00000449426 2884 ntBASIC5.38□□□□□ -1.55
CDH3P22223 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CDH3P22223 MT-RNR2-201ENST00000387347 1559 ntBASIC5.38□□□□□ -1.55
CDH3P22223 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDH3P22223 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CDH3P22223 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH3P22223 AL391361.1-201ENST00000405580 489 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AL009179.1-201ENST00000406085 265 ntBASIC5.38□□□□□ -1.55
CDH3P22223 RNU6-564P-201ENST00000410983 104 ntBASIC5.38□□□□□ -1.55
CDH3P22223 SETP15-201ENST00000412724 337 ntBASIC5.38□□□□□ -1.55
CDH3P22223 Z93019.1-201ENST00000416450 973 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 MAPRE1P3-201ENST00000435438 796 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AC019185.1-201ENST00000442718 389 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 TAAR4P-201ENST00000454843 1039 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AL133445.1-201ENST00000467051 452 ntBASIC5.38□□□□□ -1.55
CDH3P22223 RPL35AP19-201ENST00000469425 329 ntBASIC5.38□□□□□ -1.55
CDH3P22223 RN7SL184P-201ENST00000488308 297 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.38□□□□□ -1.55
CDH3P22223 ACTR6P1-201ENST00000514311 1104 ntBASIC5.38□□□□□ -1.55
CDH3P22223 PMS2P3-207ENST00000529061 717 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH3P22223 DHFRP1-201ENST00000579682 559 ntBASIC5.38□□□□□ -1.55
CDH3P22223 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH3P22223 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH3P22223 AL159169.2-201ENST00000610061 1269 ntBASIC5.38□□□□□ -1.55
CDH3P22223 AC003001.2-201ENST00000616294 831 ntBASIC5.38□□□□□ -1.55
CDH3P22223 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH3P22223 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDH3P22223 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH3P22223 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.38□□□□□ -1.55
CDH3P22223 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 AC011755.1-201ENST00000623763 2049 ntBASIC5.38□□□□□ -1.55
CDH3P22223 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH3P22223 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH3P22223 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH3P22223 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH3P22223 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms