Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC005341.1-201ENST00000571086 708 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 RN7SL356P-201ENST00000582228 248 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 FKBP1AP1-201ENST00000594588 318 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AC245128.3-201ENST00000594721 748 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AC022387.2-201ENST00000604050 448 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AC020658.4-201ENST00000613987 684 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDGFRAP16234 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFRAP16234 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 MIR133B-201ENST00000362210 119 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 MARK2P12-201ENST00000420129 585 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AL354766.1-201ENST00000423396 542 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AC017019.1-201ENST00000426129 261 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 CYCSP6-201ENST00000434498 302 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 RPL7P45-201ENST00000455851 743 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 MTND6P32-201ENST00000457611 483 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AC110749.1-201ENST00000462007 357 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AP000797.2-201ENST00000475768 606 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 RN7SL177P-201ENST00000476596 299 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 RN7SL629P-201ENST00000489622 285 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 RPSAP51-201ENST00000497462 645 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFRAP16234 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AC009027.1-201ENST00000604510 479 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AL133406.3-201ENST00000606817 541 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AC100814.1-201ENST00000606963 623 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AL356608.1-201ENST00000610034 820 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AC015922.4-201ENST00000612568 690 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 AC109583.2-201ENST00000617367 129 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AP003400.3-201ENST00000624904 346 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDGFRAP16234 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDGFRAP16234 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.63□□□□□ -1.51
PDGFRAP16234 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.63□□□□□ -1.51
PDGFRAP16234 AC079298.1-201ENST00000625026 1619 ntBASIC5.63□□□□□ -1.51
PDGFRAP16234 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDGFRAP16234 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 AL078621.3-201ENST00000623707 2042 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFRAP16234 RNA5SP335-201ENST00000363817 110 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 MAPRE1P3-201ENST00000435438 796 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFRAP16234 GAPDHP25-201ENST00000447061 1001 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC011225.1-201ENST00000457751 369 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 RNU6-319P-201ENST00000516025 108 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 RN7SKP34-201ENST00000516142 244 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 CDC42P3-201ENST00000518493 633 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFRAP16234 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFRAP16234 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.62□□□□□ -1.51
PDGFRAP16234 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 IMMP1LP3-201ENST00000604197 224 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDGFRAP16234 AC136428.4-201ENST00000634254 1155 ntBASIC5.62□□□□□ -1.51
PDGFRAP16234 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PDGFRAP16234 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms