Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.78□□□□□ -1.64
SPTA1P02549 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 AL445423.1-201ENST00000609941 536 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SPTA1P02549 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.78□□□□□ -1.64
SPTA1P02549 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.78□□□□□ -1.64
SPTA1P02549 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC4.78□□□□□ -1.64
SPTA1P02549 MTCO1P15-201ENST00000529569 1526 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.78□□□□□ -1.64
SPTA1P02549 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 NCOA4P3-201ENST00000513203 1877 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 RNA5SP332-201ENST00000391063 115 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 RPL10P10-201ENST00000403509 664 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 GPS2P1-201ENST00000411761 986 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 AC004074.1-201ENST00000421810 1063 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.78□□□□□ -1.64
SPTA1P02549 RPL12P28-201ENST00000430852 489 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 ATP5LP5-201ENST00000483050 299 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.78□□□□□ -1.64
SPTA1P02549 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.78□□□□□ -1.64
SPTA1P02549 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 AC245389.1-201ENST00000605141 529 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.78□□□□□ -1.64
SPTA1P02549 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.78□□□□□ -1.64
SPTA1P02549 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 KARSP3-201ENST00000571212 1504 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTA1P02549 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.78□□□□□ -1.64
SPTA1P02549 ABCC13-202ENST00000463099 3842 ntBASIC4.78□□□□□ -1.64
SPTA1P02549 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTA1P02549 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.78□□□□□ -1.65
SPTA1P02549 AL031595.2-201ENST00000624215 19071 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 FAM3C2-201ENST00000312214 681 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.77□□□□□ -1.65
SPTA1P02549 NANOGP9-201ENST00000439890 892 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 COX6B1P5-201ENST00000509843 249 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.77□□□□□ -1.65
SPTA1P02549 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.77□□□□□ -1.65
SPTA1P02549 AP000619.2-201ENST00000546014 969 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.77□□□□□ -1.65
SPTA1P02549 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.77□□□□□ -1.65
SPTA1P02549 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.77□□□□□ -1.65
SPTA1P02549 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 Z98755.1-201ENST00000407015 1384 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 CASC19-255ENST00000641733 1385 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.77□□□□□ -1.65
SPTA1P02549 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SPTA1P02549 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SPTA1P02549 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.77□□□□□ -1.65
SPTA1P02549 SNORD56.6-201ENST00000384569 71 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 RPL12P34-201ENST00000424532 479 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.77□□□□□ -1.65
SPTA1P02549 RPL5P25-201ENST00000441148 775 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC011005.3-201ENST00000491624 395 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.77□□□□□ -1.65
SPTA1P02549 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.77□□□□□ -1.65
SPTA1P02549 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.77□□□□□ -1.65
SPTA1P02549 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.77□□□□□ -1.65
SPTA1P02549 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.77□□□□□ -1.65
SPTA1P02549 MIR3667-201ENST00000581025 74 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AL513327.3-201ENST00000602618 469 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC099676.1-201ENST00000608886 657 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AP005131.7-201ENST00000610087 611 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 AC023043.4-201ENST00000612081 449 ntBASIC4.77□□□□□ -1.65
SPTA1P02549 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC4.77□□□□□ -1.65
SPTA1P02549 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC4.77□□□□□ -1.65
SPTA1P02549 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPTA1P02549 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SPTA1P02549 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.76□□□□□ -1.65
SPTA1P02549 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SPTA1P02549 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SPTA1P02549 ELOCP19-201ENST00000411919 318 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 CENPIP1-201ENST00000425713 902 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AC011742.2-201ENST00000443818 352 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AC083829.1-201ENST00000503756 657 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 AC025674.1-201ENST00000507074 324 ntBASIC4.76□□□□□ -1.65
SPTA1P02549 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms