Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 MED15P9-201ENST00000424716 533 ntBASIC8.2□□□□□ -1.1
RNF40O75150 RPL5P34-201ENST00000426545 891 ntBASIC8.2□□□□□ -1.1
RNF40O75150 ISCA1P6-201ENST00000427740 390 ntBASIC8.2□□□□□ -1.1
RNF40O75150 AC133104.1-201ENST00000429100 218 ntBASIC8.2□□□□□ -1.1
RNF40O75150 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 HMGB1P18-201ENST00000438801 619 ntBASIC8.2□□□□□ -1.1
RNF40O75150 RPS19P6-201ENST00000441327 433 ntBASIC8.2□□□□□ -1.1
RNF40O75150 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF40O75150 MTND1P12-201ENST00000455231 147 ntBASIC8.2□□□□□ -1.1
RNF40O75150 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 AC010655.3-201ENST00000478818 450 ntBASIC8.2□□□□□ -1.1
RNF40O75150 AL135752.1-201ENST00000479477 471 ntBASIC8.2□□□□□ -1.1
RNF40O75150 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 AC034159.1-201ENST00000513885 583 ntBASIC8.2□□□□□ -1.1
RNF40O75150 RNU2-46P-201ENST00000517038 113 ntBASIC8.2□□□□□ -1.1
RNF40O75150 IGLV10-67-201ENST00000519446 325 ntBASIC8.2□□□□□ -1.1
RNF40O75150 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF40O75150 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF40O75150 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF40O75150 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF40O75150 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF40O75150 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.2□□□□□ -1.1
RNF40O75150 HYKK-203ENST00000563233 734 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.2□□□□□ -1.1
RNF40O75150 DPPA3P3-201ENST00000603842 430 ntBASIC8.2□□□□□ -1.1
RNF40O75150 AC010591.1-201ENST00000603941 649 ntBASIC8.2□□□□□ -1.1
RNF40O75150 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RNF40O75150 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.2□□□□□ -1.1
RNF40O75150 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
RNF40O75150 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.2□□□□□ -1.1
RNF40O75150 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RNF40O75150 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 ZNF840P-201ENST00000504759 1996 ntBASIC8.19□□□□□ -1.1
RNF40O75150 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RNF40O75150 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 MIR548I3-201ENST00000408378 149 ntBASIC8.19□□□□□ -1.1
RNF40O75150 MIR548I1-201ENST00000408810 149 ntBASIC8.19□□□□□ -1.1
RNF40O75150 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 RAD23BP1-201ENST00000421404 1227 ntBASIC8.19□□□□□ -1.1
RNF40O75150 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 AC109583.1-201ENST00000432156 268 ntBASIC8.19□□□□□ -1.1
RNF40O75150 AC098828.1-201ENST00000436164 440 ntBASIC8.19□□□□□ -1.1
RNF40O75150 AC239860.1-201ENST00000444680 1270 ntBASIC8.19□□□□□ -1.1
RNF40O75150 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.19□□□□□ -1.1
RNF40O75150 RPL5P15-201ENST00000475870 897 ntBASIC8.19□□□□□ -1.1
RNF40O75150 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 AP000790.1-201ENST00000528891 737 ntBASIC8.19□□□□□ -1.1
RNF40O75150 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC8.19□□□□□ -1.1
RNF40O75150 MIR744-201ENST00000578242 98 ntBASIC8.19□□□□□ -1.1
RNF40O75150 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 AC012065.3-201ENST00000602736 439 ntBASIC8.19□□□□□ -1.1
RNF40O75150 CTHRC1P1-201ENST00000605383 469 ntBASIC8.19□□□□□ -1.1
RNF40O75150 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 AC073488.2-201ENST00000631903 751 ntBASIC8.19□□□□□ -1.1
RNF40O75150 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.19□□□□□ -1.1
RNF40O75150 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.19□□□□□ -1.1
RNF40O75150 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
RNF40O75150 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms