Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC004690.1-201ENST00000418216 328 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC004448.2-201ENST00000422360 586 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.19□□□□□ -1.58
SHOX2O60902 NDUFS5P5-201ENST00000437256 321 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 RPS26P2-201ENST00000440331 348 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 MRPL48P1-201ENST00000445390 636 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC009963.3-201ENST00000458090 486 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC094085.1-201ENST00000468914 584 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.19□□□□□ -1.58
SHOX2O60902 RPS4XP14-201ENST00000493072 781 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 RBBP4P1-201ENST00000502424 1276 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC091874.2-201ENST00000505889 720 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC106872.4-201ENST00000510050 523 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 HSD3BP3-201ENST00000514706 994 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.19□□□□□ -1.58
SHOX2O60902 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.19□□□□□ -1.58
SHOX2O60902 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC079905.1-201ENST00000549280 475 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 RPL21P7-201ENST00000557463 483 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 DPPA2P4-201ENST00000563717 878 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC002519.2-203ENST00000567043 837 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 MIR4700-201ENST00000578311 74 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.19□□□□□ -1.58
SHOX2O60902 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 MIR6793-201ENST00000612376 63 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 AC026124.2-201ENST00000621847 656 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.19□□□□□ -1.58
SHOX2O60902 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 AC007382.1-201ENST00000624376 2618 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHOX2O60902 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHOX2O60902 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 AC104966.1-201ENST00000467010 1464 ntBASIC5.19□□□□□ -1.58
SHOX2O60902 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SHOX2O60902 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SHOX2O60902 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 AC017104.4-201ENST00000636283 1592 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 CASC19-238ENST00000641523 1558 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 RARSP1-201ENST00000542842 1418 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 COX6B1P3-201ENST00000312310 260 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 RNA5SP273-201ENST00000362484 113 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.18□□□□□ -1.58
SHOX2O60902 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.18□□□□□ -1.58
SHOX2O60902 EIF4HP2-201ENST00000424380 563 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 RPS29P14-201ENST00000431518 171 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 VN1R110P-201ENST00000438988 971 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 AMYP1-201ENST00000440059 1023 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.18□□□□□ -1.58
SHOX2O60902 CFL1P4-201ENST00000451536 498 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 PPIAP27-201ENST00000453800 265 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 AC114781.3-201ENST00000512083 142 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 LDHBP3-201ENST00000514909 822 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 RNA5SP438-201ENST00000516561 112 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.18□□□□□ -1.58
SHOX2O60902 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.18□□□□□ -1.58
SHOX2O60902 AC007956.1-201ENST00000555623 542 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 AC007066.2-202ENST00000566531 914 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.18□□□□□ -1.58
SHOX2O60902 AC011445.2-201ENST00000599274 173 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.18□□□□□ -1.58
SHOX2O60902 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHOX2O60902 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 AL672167.1-205ENST00000641112 3080 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.18□□□□□ -1.58
SHOX2O60902 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHOX2O60902 SAMMSON-213ENST00000641336 1521 ntBASIC5.18□□□□□ -1.58
SHOX2O60902 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHOX2O60902 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms