Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC093909.5-201ENST00000621839 1799 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AL513548.1-201ENST00000562904 1724 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC019072.1-201ENST00000604535 1551 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 SCN1A-220ENST00000641603 12506 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 RN7SKP125-201ENST00000410481 302 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 OR6E1P-201ENST00000414424 923 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 RPL34P3-201ENST00000421454 338 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 RPS26P4-201ENST00000431743 355 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 RPS29P10-201ENST00000439197 166 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 PCNPP2-201ENST00000441651 455 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 RPS11P7-201ENST00000442125 465 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AC004980.3-201ENST00000447046 365 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 RN7SL51P-201ENST00000468230 285 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC020779.1-201ENST00000478757 796 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 RN7SL612P-201ENST00000497704 295 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AC006499.4-201ENST00000510947 694 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 RNU6-943P-201ENST00000516960 98 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AC011853.1-201ENST00000518911 454 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 TRIM77BP-201ENST00000524985 1119 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.81□□□□□ -1.8
SH2D1AO60880 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 MTND2P17-201ENST00000550281 688 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AL451049.1-201ENST00000608672 497 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AC000068.2-201ENST00000608816 460 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC092747.4-201ENST00000620519 1861 ntBASIC3.81□□□□□ -1.8
SH2D1AO60880 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.81□□□□□ -1.8
SH2D1AO60880 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SH2D1AO60880 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH2D1AO60880 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SH2D1AO60880 AC092111.2-201ENST00000611627 1414 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 NAMPTP1-201ENST00000440465 2514 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 CR383656.5-201ENST00000547616 1340 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 OR56A4-201ENST00000330728 1209 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 RNA5SP46-201ENST00000362370 120 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 OOSP1-201ENST00000398992 1270 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.8□□□□□ -1.8
SH2D1AO60880 AL596448.1-201ENST00000415024 392 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 EIF4A1P1-201ENST00000420241 934 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.8□□□□□ -1.8
SH2D1AO60880 TNPO1P1-201ENST00000423641 1138 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.8□□□□□ -1.8
SH2D1AO60880 AC244033.1-201ENST00000426826 870 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.8□□□□□ -1.8
SH2D1AO60880 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.8□□□□□ -1.8
SH2D1AO60880 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SH2D1AO60880 CYCSP34-201ENST00000458172 304 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AC112206.1-201ENST00000468416 477 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AP002884.1-201ENST00000479691 655 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.8□□□□□ -1.8
SH2D1AO60880 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SH2D1AO60880 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.8□□□□□ -1.8
SH2D1AO60880 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.8□□□□□ -1.8
SH2D1AO60880 AC012400.1-201ENST00000518452 381 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.8□□□□□ -1.8
SH2D1AO60880 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.8□□□□□ -1.8
SH2D1AO60880 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.8□□□□□ -1.8
SH2D1AO60880 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.8□□□□□ -1.8
SH2D1AO60880 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.8□□□□□ -1.8
SH2D1AO60880 AC005868.1-201ENST00000536421 331 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.8□□□□□ -1.8
SH2D1AO60880 BLZF2P-201ENST00000553776 1130 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AL049830.4-201ENST00000555149 351 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 SETP1-201ENST00000556014 845 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.8□□□□□ -1.8
SH2D1AO60880 CYCSP40-201ENST00000575927 294 ntBASIC3.8□□□□□ -1.8
SH2D1AO60880 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms