Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
CUX2O14529 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CUX2O14529 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.87□□□□□ -0.99
CUX2O14529 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.87□□□□□ -0.99
CUX2O14529 RNA5SP509-201ENST00000364577 119 ntBASIC8.87□□□□□ -0.99
CUX2O14529 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.87□□□□□ -0.99
CUX2O14529 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.87□□□□□ -0.99
CUX2O14529 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.87□□□□□ -0.99
CUX2O14529 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.87□□□□□ -0.99
CUX2O14529 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC8.87□□□□□ -0.99
CUX2O14529 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
CUX2O14529 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
CUX2O14529 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CUX2O14529 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CUX2O14529 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
CUX2O14529 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.86□□□□□ -0.99
CUX2O14529 ST13P16-201ENST00000401760 781 ntBASIC8.86□□□□□ -0.99
CUX2O14529 Z97832.1-201ENST00000402490 328 ntBASIC8.86□□□□□ -0.99
CUX2O14529 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC8.86□□□□□ -0.99
CUX2O14529 BX679664.2-201ENST00000439282 283 ntBASIC8.86□□□□□ -0.99
CUX2O14529 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 AC011276.1-201ENST00000469688 323 ntBASIC8.86□□□□□ -0.99
CUX2O14529 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
CUX2O14529 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.86□□□□□ -0.99
CUX2O14529 AC021106.1-201ENST00000509020 1058 ntBASIC8.86□□□□□ -0.99
CUX2O14529 AP003080.1-202ENST00000526526 915 ntBASIC8.86□□□□□ -0.99
CUX2O14529 OR5M2P-201ENST00000529003 936 ntBASIC8.86□□□□□ -0.99
CUX2O14529 AC122688.1-201ENST00000541494 223 ntBASIC8.86□□□□□ -0.99
CUX2O14529 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.86□□□□□ -0.99
CUX2O14529 AL138960.1-201ENST00000613838 513 ntBASIC8.86□□□□□ -0.99
CUX2O14529 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
CUX2O14529 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.86□□□□□ -0.99
CUX2O14529 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CUX2O14529 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
CUX2O14529 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CUX2O14529 OR4F13P-202ENST00000560066 2054 ntBASIC8.85□□□□□ -0.99
CUX2O14529 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 SAMMSON-226ENST00000642089 1582 ntBASIC8.85□□□□□ -0.99
CUX2O14529 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
CUX2O14529 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 SNORA70C-201ENST00000384538 135 ntBASIC8.85□□□□□ -0.99
CUX2O14529 RN7SKP106-201ENST00000410832 272 ntBASIC8.85□□□□□ -0.99
CUX2O14529 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.85□□□□□ -0.99
CUX2O14529 OR1H1P-201ENST00000448731 937 ntBASIC8.85□□□□□ -0.99
CUX2O14529 AC092754.1-201ENST00000472975 479 ntBASIC8.85□□□□□ -0.99
CUX2O14529 MRPS33P2-201ENST00000507850 322 ntBASIC8.85□□□□□ -0.99
CUX2O14529 MIR2116-201ENST00000517221 80 ntBASIC8.85□□□□□ -0.99
CUX2O14529 SOX5P1-201ENST00000524155 1127 ntBASIC8.85□□□□□ -0.99
CUX2O14529 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.85□□□□□ -0.99
CUX2O14529 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.85□□□□□ -0.99
CUX2O14529 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.85□□□□□ -0.99
CUX2O14529 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.85□□□□□ -0.99
CUX2O14529 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.85□□□□□ -0.99
CUX2O14529 AP005131.7-201ENST00000610087 611 ntBASIC8.85□□□□□ -0.99
CUX2O14529 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.85□□□□□ -0.99
CUX2O14529 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
CUX2O14529 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.85□□□□□ -0.99
CUX2O14529 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CUX2O14529 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CUX2O14529 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CUX2O14529 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.84□□□□□ -0.99
CUX2O14529 SNORA73.1-201ENST00000363107 205 ntBASIC8.84□□□□□ -0.99
CUX2O14529 AL137845.2-201ENST00000444292 988 ntBASIC8.84□□□□□ -0.99
CUX2O14529 RN7SL542P-201ENST00000467147 294 ntBASIC8.84□□□□□ -0.99
CUX2O14529 RPL7P40-201ENST00000481703 745 ntBASIC8.84□□□□□ -0.99
CUX2O14529 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC8.84□□□□□ -0.99
CUX2O14529 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC8.84□□□□□ -0.99
CUX2O14529 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.84□□□□□ -0.99
CUX2O14529 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CUX2O14529 LCOR-201ENST00000286067 4542 ntBASIC8.84□□□□□ -0.99
CUX2O14529 ZNF969P-201ENST00000510345 2341 ntBASIC8.84□□□□□ -0.99
CUX2O14529 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.84□□□□□ -0.99
CUX2O14529 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.84□□□□□ -0.99
CUX2O14529 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CUX2O14529 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CUX2O14529 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CUX2O14529 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CUX2O14529 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms