Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORD65-201ENST00000391079 73 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC005042.1-201ENST00000393397 800 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 SPTLC1P2-201ENST00000407089 121 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 MTCYBP7-201ENST00000419540 1134 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 CR848007.2-201ENST00000424918 787 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AL500527.1-201ENST00000448532 255 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 HIGD1AP14-201ENST00000507617 282 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 HMGB1P47-201ENST00000511281 589 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 MTND2P31-201ENST00000512602 616 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC111000.6-201ENST00000514471 709 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 CDC42P3-201ENST00000518493 633 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 OR8Q1P-201ENST00000526467 655 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 SNORD39.2-201ENST00000579995 76 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 H3F3BP2-201ENST00000583907 357 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AL512329.2-201ENST00000607350 548 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC093388.1-201ENST00000609166 430 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AL118522.2-201ENST00000616045 615 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC016769.4-201ENST00000616893 535 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC099654.6-201ENST00000636487 512 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AL163152.1-201ENST00000642001 374 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 MT-RNR2-201ENST00000387347 1559 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC109780.1-201ENST00000451768 1344 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC087516.1-201ENST00000561236 2428 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 MIR223-201ENST00000385204 110 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AL009179.1-201ENST00000406085 265 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 DPPA2P3-201ENST00000411853 655 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 OR6D1P-201ENST00000436165 939 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 NANOGP9-201ENST00000439890 892 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 OR11I1P-201ENST00000486033 954 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC024558.1-201ENST00000505008 528 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC006499.3-201ENST00000506077 748 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 FABP5P6-201ENST00000510588 409 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 ACTR6P1-201ENST00000514311 1104 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AL049779.2-201ENST00000553847 315 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC044860.2-201ENST00000561005 179 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AL731537.2-201ENST00000561565 951 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC002069.2-201ENST00000603580 883 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC119501.1-201ENST00000603646 475 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC007620.3-201ENST00000608131 497 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 AC025574.2-201ENST00000615621 514 ntBASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA3F8WFD2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms