Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC009237.13-201ENST00000603193 276 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 SUMO2P15-201ENST00000604285 278 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AP000240.1-201ENST00000609910 452 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL356752.1-201ENST00000615844 593 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC104307.1-201ENST00000616142 196 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC109583.2-201ENST00000617367 129 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC080188.3-201ENST00000624842 748 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 OR9K1P-202ENST00000641111 3217 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC093849.1-201ENST00000563631 2209 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RNA5SP183-201ENST00000362452 119 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RNA5SP453-201ENST00000362503 119 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 OR6K3-202ENST00000368146 996 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 OR4K12P-201ENST00000406538 961 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AP000534.2-201ENST00000412729 568 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 FAM96AP1-201ENST00000430879 482 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC114878.1-201ENST00000441166 358 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 MTND2P39-201ENST00000457230 764 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC025181.1-201ENST00000477507 416 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RPS4XP14-201ENST00000493072 781 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC024558.1-201ENST00000505008 528 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RFPL4AP3-201ENST00000515267 345 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 OR4A17P-201ENST00000526032 904 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AL049779.2-201ENST00000553847 315 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC005341.1-201ENST00000571086 708 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC022387.2-201ENST00000604050 448 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 WBP1LP8-201ENST00000617401 327 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC008115.4-201ENST00000619780 775 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC138965.3-201ENST00000623875 498 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 AC005618.4-201ENST00000625053 554 ntBASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX9Q9Y5X1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 RN7SKP185-201ENST00000362813 326 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 SNORA5.1-201ENST00000384275 131 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 RNU6-171P-201ENST00000384354 107 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 AC234781.4-201ENST00000419384 244 ntBASIC5.78□□□□□ -1.48
SNX9Q9Y5X1 BX510359.3-201ENST00000422168 306 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms