Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RNU1-134P-201ENST00000362935 165 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 SNORD1C-201ENST00000363315 78 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RNU6-932P-201ENST00000391108 106 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL590806.1-201ENST00000415818 853 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 YWHAZP2-201ENST00000440317 728 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 BMS1P10-201ENST00000443754 1120 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 TRIM60P16-201ENST00000444048 694 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 HMGN1P36-201ENST00000446623 298 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL162739.1-201ENST00000450606 307 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF886P-201ENST00000450781 723 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RPL7P32-201ENST00000457119 744 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC011476.1-201ENST00000466725 307 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SL717P-201ENST00000478343 297 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC124945.1-201ENST00000485133 188 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 MTCO3P35-201ENST00000485582 781 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 MTCYBP35-201ENST00000503630 1137 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC002456.2-201ENST00000509356 380 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 CR383658.1-201ENST00000514609 734 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SKP67-201ENST00000515905 235 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL049779.3-201ENST00000557141 606 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SL622P-201ENST00000585292 275 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC119403.2-201ENST00000590960 598 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC022467.1-201ENST00000614738 749 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC021755.4-201ENST00000616620 456 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC245014.3-201ENST00000618589 347 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC138907.10-201ENST00000623708 983 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 FRG1EP-201ENST00000634469 770 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC090897.3-201ENST00000636973 1157 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AL662795.2-201ENST00000624252 3706 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 AC107021.2-201ENST00000567714 2095 ntBASIC6.02□□□□□ -1.45
PCDHB1Q9Y5F3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 PSG10P-201ENST00000501199 1500 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SKP292-201ENST00000365522 317 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 MIR142-201ENST00000384835 87 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL021331.1-201ENST00000402817 582 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 RN7SKP97-201ENST00000410966 333 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL096829.1-201ENST00000413677 457 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AC107081.1-201ENST00000414975 361 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 MTND4P3-201ENST00000417829 541 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL449283.1-202ENST00000418249 604 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 FO393419.3-201ENST00000428741 282 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 AL365220.1-201ENST00000432923 399 ntBASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB1Q9Y5F3 GAPDHP48-201ENST00000436626 961 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms