Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC009804.1-201ENST00000400949 179 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 RAB9AP4-201ENST00000415230 609 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 NANOGP4-201ENST00000427230 913 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 GAPDHP58-201ENST00000438477 1006 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC012512.1-201ENST00000446594 718 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 RN7SL570P-201ENST00000484405 292 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC073610.1-201ENST00000489971 396 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC091917.2-201ENST00000505002 744 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 FTH1P11-201ENST00000517577 551 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 OR10G5P-201ENST00000532733 358 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 SUGT1P3-202ENST00000604259 383 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC010245.2-201ENST00000606908 1167 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC004948.1-201ENST00000609858 672 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC091932.2-201ENST00000623014 291 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 PABPC1P6-201ENST00000445594 1829 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 AL034549.2-201ENST00000618285 3373 ntBASIC5.08□□□□□ -1.6
RNF6Q9Y252 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF6Q9Y252 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF6Q9Y252 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 GAPDHP42-201ENST00000406848 981 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 CTSL3P-202ENST00000412179 788 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL445213.1-201ENST00000412589 747 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC211486.3-201ENST00000412694 621 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 RPSAP35-201ENST00000413753 818 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 RPL35AP24-201ENST00000413846 330 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL596266.1-201ENST00000448132 400 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC090804.1-201ENST00000448870 490 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 RN7SL583P-201ENST00000475692 287 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 RPL7P39-201ENST00000481157 744 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 EIF1P7-201ENST00000487533 337 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AGGF1P3-201ENST00000493675 1213 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 IGBP1P4-201ENST00000503202 879 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 MYL12BP2-201ENST00000503948 512 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC016559.2-201ENST00000510759 359 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 MTCYBP13-201ENST00000578634 1093 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC037198.3-201ENST00000616754 526 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms