Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 RN7SL290P-201ENST00000578661 300 ntBASIC6.48□□□□□ -1.37
SCN11AQ9UI33 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SCN11AQ9UI33 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AC073342.2-201ENST00000595842 1800 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AL390316.1-201ENST00000406279 553 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 MRPS21P2-201ENST00000424704 264 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AC046176.1-201ENST00000435260 1170 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 RPSAP51-201ENST00000497462 645 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AC018558.5-201ENST00000565840 952 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 PRELID3BP3-201ENST00000584963 545 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AP001521.2-201ENST00000608772 546 ntBASIC6.47□□□□□ -1.37
SCN11AQ9UI33 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCN11AQ9UI33 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SCN11AQ9UI33 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
SCN11AQ9UI33 SNORA48.4-201ENST00000391089 134 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 P2RY10P2-201ENST00000416730 913 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 COX6CP17-201ENST00000421389 185 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 AL359265.1-201ENST00000440296 795 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 C1GALT1P3-201ENST00000522049 819 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.37
SCN11AQ9UI33 AC020910.2-201ENST00000603635 610 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.46□□□□□ -1.37
SCN11AQ9UI33 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.37
SCN11AQ9UI33 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.46□□□□□ -1.37
SCN11AQ9UI33 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 RNA5SP332-201ENST00000391063 115 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AL049697.2-201ENST00000403708 294 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 OR2B7P-201ENST00000429302 934 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AL359265.2-201ENST00000434367 631 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 NDUFA12P1-201ENST00000455914 406 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AC111000.6-201ENST00000514471 709 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AL023583.1-201ENST00000607518 1143 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AL161616.1-201ENST00000611867 286 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AC010480.1-201ENST00000624823 684 ntBASIC6.46□□□□□ -1.38
SCN11AQ9UI33 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN11AQ9UI33 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AL022323.4-201ENST00000623980 13120 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 ATP5HP3-201ENST00000396994 486 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 FABP7P1-201ENST00000424004 391 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AL356390.1-201ENST00000455684 397 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 RN7SL354P-201ENST00000469282 294 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 RN7SL319P-201ENST00000480656 221 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AC092709.1-201ENST00000521355 1045 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AL138960.1-201ENST00000613838 513 ntBASIC6.45□□□□□ -1.38
SCN11AQ9UI33 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms