Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 RNU6-549P-201ENST00000384433 107 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 SNORD65C-201ENST00000390962 71 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 RPL23AP59-201ENST00000399415 461 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 RN7SKP161-201ENST00000411110 305 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 MTND4P22-201ENST00000413116 1169 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL035407.1-201ENST00000429211 571 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL645936.1-201ENST00000441979 518 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 CUBNP2-201ENST00000443534 1139 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 TIMM8BP2-201ENST00000445940 251 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 RANP2-201ENST00000456833 229 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 MARK2P8-201ENST00000476069 952 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC107398.1-201ENST00000486904 505 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 UGT2A3P7-201ENST00000510485 734 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 MTCYBP20-201ENST00000524239 1129 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL078601.3-201ENST00000573303 535 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC015688.2-201ENST00000584523 262 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC135507.1-201ENST00000607214 561 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL135999.3-201ENST00000610501 812 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AL049737.1-201ENST00000413920 1403 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 ZNF402P-201ENST00000404435 3100 ntBASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.47□□□□□ -1.37
PPARGC1AQ9UBK2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 AC090181.3-201ENST00000624777 1514 ntBASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 AC245100.2-201ENST00000454544 1679 ntBASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PPARGC1AQ9UBK2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 RNA5SP346-201ENST00000363541 121 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 RNU6-413P-201ENST00000384115 107 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 SETP15-201ENST00000412724 337 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 HMGB3P31-201ENST00000413333 595 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 TNPO1P1-201ENST00000423641 1138 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC245884.2-201ENST00000426257 404 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC239798.3-201ENST00000454459 408 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AL133351.3-201ENST00000454998 193 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC113367.2-201ENST00000505749 160 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 MTCO3P7-201ENST00000510008 774 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 ZNF519P4-201ENST00000514008 125 ntBASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.46□□□□□ -1.38
PPARGC1AQ9UBK2 RN7SKP183-201ENST00000517169 324 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms