Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 SNX18P1Y-201ENST00000616231 511 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AL137058.3-201ENST00000624531 3099 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 MAPK10-304ENST00000641341 3984 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 ATP5F1P2-201ENST00000398143 760 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AP001324.1-201ENST00000428553 399 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 RPS3AP54-201ENST00000435535 734 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 STX3-208ENST00000641815 3236 ntBASIC5.14□□□□□ -1.59
CHD7Q9P2D1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHD7Q9P2D1 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RNA5SP509-201ENST00000364577 119 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RNU1-59P-201ENST00000364829 162 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SNORA70.10-201ENST00000384515 134 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RPL19P16-201ENST00000433839 588 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 U1.25-201ENST00000614085 162 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 U1.34-201ENST00000618578 162 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 U1.31-201ENST00000620022 160 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AL731566.1-201ENST00000620490 1937 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RPL34P6-201ENST00000432390 345 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RPL23AP83-201ENST00000434984 473 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AL162591.2-201ENST00000449634 317 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 RN7SL189P-201ENST00000468631 289 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SNORA67.7-201ENST00000516664 135 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 UGT2B26P-201ENST00000508672 1613 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 CYP1D1P-201ENST00000416662 1433 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AL390316.1-201ENST00000406279 553 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC009237.10-201ENST00000414112 510 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC009237.5-201ENST00000414271 501 ntBASIC5.13□□□□□ -1.59
CHD7Q9P2D1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.13□□□□□ -1.59
CHD7Q9P2D1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AC060780.2-201ENST00000589047 198 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.12□□□□□ -1.59
CHD7Q9P2D1 ARF4P1-201ENST00000605447 541 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 ZYXP1-201ENST00000617638 118 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 AL049536.1-201ENST00000625043 744 ntBASIC5.12□□□□□ -1.59
CHD7Q9P2D1 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms