Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 SNORA17.5-201ENST00000630429 132 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC003992.1-201ENST00000635364 557 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC116667.2-201ENST00000641075 823 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AF287957.1-201ENST00000607368 1595 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC091305.2-201ENST00000624049 1576 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 GNL2P1-201ENST00000451274 2190 ntBASIC5.57□□□□□ -1.52
LRFN1Q9P244 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRFN1Q9P244 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.57□□□□□ -1.52
LRFN1Q9P244 AC092079.1-201ENST00000558620 1985 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CCNT2P1-201ENST00000423082 1315 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 ENSAP3-201ENST00000312710 333 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 TMSB4XP2-201ENST00000335179 210 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RNU5B-1-201ENST00000363286 116 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 SNORA70H-201ENST00000383910 135 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 SNORA70J-201ENST00000384182 135 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RNU6-298P-201ENST00000390888 96 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC106883.1-201ENST00000418805 562 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 PSAT1P4-201ENST00000466500 526 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RPS27AP16-201ENST00000492222 470 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 IGKV2-19-201ENST00000518132 283 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 ATP5F1P7-201ENST00000567330 760 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RNU4ATAC-201ENST00000580972 127 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC125494.3-201ENST00000602759 455 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AL021368.3-201ENST00000607119 578 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AL121652.1-201ENST00000608851 448 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC027449.1-201ENST00000608890 407 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC055764.2-201ENST00000610089 670 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AL669942.2-201ENST00000620352 697 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 AL357562.1-201ENST00000624911 609 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 U6.107-201ENST00000637108 79 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AC012254.3-201ENST00000591183 2117 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
LRFN1Q9P244 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 AL137100.1-201ENST00000556703 1620 ntBASIC5.56□□□□□ -1.52
LRFN1Q9P244 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRFN1Q9P244 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.55□□□□□ -1.52
LRFN1Q9P244 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LRFN1Q9P244 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LRFN1Q9P244 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRFN1Q9P244 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LRFN1Q9P244 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.55□□□□□ -1.52
LRFN1Q9P244 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 670.2 ms