Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC012360.2-201ENST00000609349 391 ntBASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 AL135999.3-201ENST00000610501 812 ntBASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 MIR7854-201ENST00000620068 65 ntBASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 IFIT1P1-201ENST00000400497 1449 ntBASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC85AQ96PX6 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC009135.2-201ENST00000624136 1768 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 RNY4P24-201ENST00000362735 96 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 MRPS6P2-201ENST00000381143 370 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 RNY3P10-201ENST00000384764 102 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC112653.1-201ENST00000443851 386 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 MTND5P20-201ENST00000448677 143 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL035407.2-201ENST00000454090 378 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 RNA5SP269-201ENST00000459032 137 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 RNA5SP418-201ENST00000515951 117 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL133399.1-201ENST00000527476 298 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AP000662.1-201ENST00000530952 487 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL078601.3-201ENST00000573303 535 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 U1.41-201ENST00000617626 165 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC099654.14-201ENST00000638599 341 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL353743.4-201ENST00000422653 1547 ntBASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.18□□□□□ -1.1
CCDC85AQ96PX6 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 CYCSP46-201ENST00000423569 204 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 DUTP4-201ENST00000424782 475 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 RWDD4P2-201ENST00000426392 563 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 MTND3P21-201ENST00000433774 331 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC093155.1-201ENST00000440164 826 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 TRIM60P18-201ENST00000441518 828 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC023512.1-201ENST00000444513 499 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC114755.5-201ENST00000447760 831 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms