Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL354718.1-201ENST00000619764 589 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MIR6813-201ENST00000621638 56 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC007342.8-201ENST00000623278 678 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL596244.1-201ENST00000567068 3779 ntBASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCHD1Q96NR3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 ZNF658B-201ENST00000602828 3408 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 RNU6-543P-201ENST00000362576 108 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 RNU6-253P-201ENST00000384730 105 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 RPS27AP11-201ENST00000402798 447 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL033519.1-201ENST00000407266 307 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC017035.1-201ENST00000411999 1115 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 RANP6-201ENST00000413691 644 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL590806.1-201ENST00000415818 853 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC093084.1-201ENST00000424233 687 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 UBBP5-201ENST00000446970 266 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 RHEBP2-201ENST00000450289 600 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC073476.1-201ENST00000452854 407 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 KATNBL1P6-201ENST00000453433 915 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC026254.2-201ENST00000475295 371 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC109486.1-201ENST00000486833 374 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 SNRPCP11-201ENST00000492453 205 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC096754.1-201ENST00000508904 818 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC104108.1-201ENST00000509930 412 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 DUXAP2-201ENST00000519198 589 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 FAM106CP-201ENST00000582212 507 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC020765.1-201ENST00000604296 328 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC131235.4-201ENST00000609288 620 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC024595.1-201ENST00000623088 387 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC005609.4-201ENST00000625071 447 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 PCMTD1P7-201ENST00000634506 357 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC116618.1-201ENST00000634617 774 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC007603.3-201ENST00000636915 979 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 SAMMSON-209ENST00000641222 1100 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC105114.1-201ENST00000624795 1862 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 AC112255.1-201ENST00000624070 2493 ntBASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCHD1Q96NR3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCHD1Q96NR3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms