Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC019322.1-201ENST00000571869 389 ntBASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC017076.1-201ENST00000607613 578 ntBASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC117490.2-201ENST00000610042 594 ntBASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.51□□□□□ -1.53
RTP4Q96DX8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP4Q96DX8 AL162233.1-201ENST00000620014 944 ntBASIC5.51□□□□□ -1.53
RTP4Q96DX8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC091932.2-201ENST00000623014 291 ntBASIC5.51□□□□□ -1.53
RTP4Q96DX8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTP4Q96DX8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTP4Q96DX8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.51□□□□□ -1.53
RTP4Q96DX8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 RNU1-19P-201ENST00000363306 165 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 RNU6-883P-201ENST00000384597 107 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 UBE2V1P15-201ENST00000407776 448 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 SFR1P2-201ENST00000421841 730 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC012075.1-201ENST00000436549 580 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 DNAJB5P1-201ENST00000454004 806 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 HMGN1P8-201ENST00000463578 288 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 AP002371.1-201ENST00000463604 433 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 BX510359.5-201ENST00000515651 304 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 RNA5SP34-201ENST00000516887 130 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AL049874.4-201ENST00000557593 255 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC009712.1-201ENST00000564938 316 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC135803.1-201ENST00000608748 565 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AL391834.2-201ENST00000609982 546 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC007204.2-201ENST00000615022 616 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC009269.6-201ENST00000621778 588 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC132068.1-201ENST00000623805 459 ntBASIC5.5□□□□□ -1.53
RTP4Q96DX8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RTP4Q96DX8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTP4Q96DX8 AL136520.1-201ENST00000600311 1322 ntBASIC5.49□□□□□ -1.53
RTP4Q96DX8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP4Q96DX8 AL592494.2-201ENST00000425455 1548 ntBASIC5.49□□□□□ -1.53
RTP4Q96DX8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTP4Q96DX8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP4Q96DX8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTP4Q96DX8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTP4Q96DX8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTP4Q96DX8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 MIR105-2-201ENST00000385083 81 ntBASIC5.49□□□□□ -1.53
RTP4Q96DX8 RN7SKP59-201ENST00000410520 314 ntBASIC5.49□□□□□ -1.53
RTP4Q96DX8 RNU6-564P-201ENST00000410983 104 ntBASIC5.49□□□□□ -1.53
RTP4Q96DX8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.49□□□□□ -1.53
RTP4Q96DX8 AC074367.1-201ENST00000438685 1125 ntBASIC5.49□□□□□ -1.53
RTP4Q96DX8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms