Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNA5SP439-201ENST00000617595 124 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 MIR7703-201ENST00000620784 77 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC020656.2-201ENST00000613291 5309 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 RNU1-43P-201ENST00000365052 165 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 OR8V1P-201ENST00000395193 873 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AL035079.1-201ENST00000405210 287 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AL360081.1-201ENST00000428299 555 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC009963.2-201ENST00000453431 138 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC093827.1-201ENST00000480094 861 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 OR5AZ1P-201ENST00000527448 943 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 ATP5J2P6-201ENST00000565203 266 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC209154.1-201ENST00000582156 337 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC011626.1-201ENST00000604710 562 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AL392048.1-201ENST00000613946 534 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC068831.8-201ENST00000620171 435 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 AC091905.4-201ENST00000623432 202 ntBASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM3Q8TF72 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AP000641.1-201ENST00000531988 1639 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 RNA5SP455-201ENST00000365190 119 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC009804.1-201ENST00000400949 179 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 RPL5P22-201ENST00000480199 884 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC079841.1-201ENST00000481228 950 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 EIF3KP3-201ENST00000514461 639 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 NPM1P5-201ENST00000557228 838 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 MIR3934-201ENST00000579806 107 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AL162431.4-201ENST00000604674 411 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 MIR6839-201ENST00000620425 113 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 PANDAR-201ENST00000629595 1506 ntBASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM3Q8TF72 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 RNU4-4P-201ENST00000364588 130 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 HYALP1-201ENST00000417674 1279 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 COX6CP17-201ENST00000421389 185 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 NDUFB4P8-201ENST00000435351 367 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 RN7SL447P-201ENST00000494711 245 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 BNIP3P1-201ENST00000547295 580 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC015720.2-201ENST00000567709 334 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AL023583.1-201ENST00000607518 1143 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 Z95327.3-201ENST00000610385 572 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC015660.5-201ENST00000623238 564 ntBASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM3Q8TF72 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms