Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 IFIT1P1-201ENST00000400497 1449 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 AC023421.1-201ENST00000590535 1785 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 DDX18P3-201ENST00000404856 2007 ntBASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC71LQ8N9Z2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AL731566.1-201ENST00000620490 1937 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC107021.2-201ENST00000567714 2095 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC000123.3-201ENST00000624029 4975 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 RNU6-1263P-201ENST00000384601 106 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 RPS20P25-201ENST00000412447 352 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AL590609.2-201ENST00000421430 368 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 YY1P1-201ENST00000427625 668 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 HMGB3P24-201ENST00000433260 622 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 RPL12P49-201ENST00000441100 121 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 DNAJB5P1-201ENST00000454004 806 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 HSPE1P22-201ENST00000456856 327 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 CST12P-201ENST00000457644 362 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 RPL15P21-201ENST00000495592 567 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AL121839.1-201ENST00000556233 1185 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 MIR4502-201ENST00000580432 81 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 NPM1P45-201ENST00000583151 559 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 NEAT1-202ENST00000501122 22743 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC100778.3-201ENST00000580060 1750 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AC083843.3-201ENST00000623679 2186 ntBASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC71LQ8N9Z2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 THAP12P5-201ENST00000405864 2275 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 HSPA8P17-201ENST00000427029 1382 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AC139713.2-215ENST00000641428 5037 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 COX6B1P3-201ENST00000312310 260 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 RNU6-386P-201ENST00000362650 107 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AL353625.1-202ENST00000366273 571 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AC240504.1-201ENST00000395709 845 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 MARK2P12-201ENST00000420129 585 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 RCC2P2-201ENST00000422174 918 ntBASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC71LQ8N9Z2 AL672138.1-201ENST00000450604 1015 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms