Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ZNF734P-201ENST00000419494 1534 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RPL24P4-201ENST00000326586 421 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 Y_RNA.166-201ENST00000363730 102 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RNA5SP472-201ENST00000363868 119 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RNU6-501P-201ENST00000364072 100 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RNU6-702P-201ENST00000364982 107 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 Y_RNA.302-201ENST00000364997 102 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RNU6-43P-201ENST00000384302 107 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RN7SKP146-201ENST00000410242 334 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 VN1R20P-201ENST00000425215 966 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AL358934.1-201ENST00000432346 324 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 OR5M13P-201ENST00000433944 937 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RPEP4-201ENST00000437636 602 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RPL31P20-201ENST00000449593 360 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RPL38P1-201ENST00000460914 211 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RN7SL751P-201ENST00000473281 284 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 RPL15P21-201ENST00000495592 567 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC009567.2-201ENST00000502989 349 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC018992.1-201ENST00000523778 2149 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AP002748.2-201ENST00000528671 348 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 PSMB7P1-201ENST00000556349 514 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC007603.3-201ENST00000636915 979 ntBASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPAS3Q8IXF0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NPAS3Q8IXF0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 SNORA22B-201ENST00000383876 138 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 Y_RNA.384-201ENST00000383909 102 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 Y_RNA.445-201ENST00000384168 102 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 FCF1P2-201ENST00000415284 583 ntBASIC7.46□□□□□ -1.22
NPAS3Q8IXF0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms