Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AL390316.1-201ENST00000406279 553 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 SETP10-201ENST00000424368 814 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC009238.2-201ENST00000431026 355 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 RPS29P10-201ENST00000439197 166 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC126177.5-201ENST00000549599 178 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 MIR3614-201ENST00000581261 86 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC005840.5-201ENST00000619166 599 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC074140.1-201ENST00000621617 208 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC132825.8-201ENST00000640783 297 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 SCARNA15-201ENST00000607520 4325 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC017079.1-201ENST00000333650 415 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 U3.3-201ENST00000362986 216 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 MIR323B-201ENST00000385269 82 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC009804.1-201ENST00000400949 179 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 RNA5SP296-201ENST00000410523 111 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 MARK2P12-201ENST00000420129 585 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC104843.2-201ENST00000427666 297 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 RPSAP39-201ENST00000467439 883 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 RN7SL717P-201ENST00000478343 297 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 RPL7P6-201ENST00000480903 738 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC097173.1-201ENST00000505862 819 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC020978.7-201ENST00000575953 1187 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 BNIP3P35-201ENST00000604530 490 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC018695.5-201ENST00000605872 315 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 FAM72A-208ENST00000607379 1139 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 CYP4F35P-202ENST00000636121 390 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 AC135068.12-201ENST00000637370 931 ntBASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CDKL3Q8IVW4 OR9K1P-202ENST00000641111 3217 ntBASIC5.34□□□□□ -1.56
CDKL3Q8IVW4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDKL3Q8IVW4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.34□□□□□ -1.56
CDKL3Q8IVW4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 SNORA67-201ENST00000384423 137 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 SEPT7P2-202ENST00000398921 823 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AL035079.1-201ENST00000405210 287 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC007386.1-201ENST00000455212 582 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC091180.1-201ENST00000462104 372 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 RN7SL184P-201ENST00000488308 297 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 LDHBP3-201ENST00000514909 822 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AP005131.7-201ENST00000610087 611 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AC004477.3-201ENST00000614061 590 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms