Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC008432.1-201ENST00000615912 1320 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 MIR130A-201ENST00000385274 89 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 PEX12P1-201ENST00000400284 1048 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC233289.1-201ENST00000403700 508 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 RN7SKP279-201ENST00000411383 298 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 MRPL53P1-201ENST00000414323 319 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AL158050.1-201ENST00000416077 457 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 BX284632.2-201ENST00000421091 399 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 CLNS1AP1-201ENST00000435954 682 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 EIF5AP4-201ENST00000441206 465 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AL512605.1-202ENST00000441919 381 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AL359955.2-201ENST00000445380 353 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 RNU6-1218P-201ENST00000458990 108 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 RPS7P6-201ENST00000485777 579 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 SNORA70.11-201ENST00000515987 138 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 SNORA70.13-201ENST00000516116 138 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC139365.2-201ENST00000517972 253 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC011853.1-201ENST00000518911 454 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC020937.1-201ENST00000519677 1013 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC015911.5-201ENST00000587076 451 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 MTATP6P2-201ENST00000603319 678 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AL359091.2-201ENST00000609303 556 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC139769.3-201ENST00000618383 175 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 GVINP1-202ENST00000531871 7271 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 AC025470.1-201ENST00000510053 2032 ntBASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.06□□□□□ -1.6
LINC00346Q8IVM7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 PDZK1P1-202ENST00000425209 1350 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 RNA5SP500-201ENST00000364486 119 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 RNU2-50P-201ENST00000410494 143 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AC092570.3-201ENST00000420113 693 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 UBE2V1P6-201ENST00000430840 422 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 NDUFS5P5-201ENST00000437256 321 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AC092013.1-201ENST00000438795 332 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 RPL7P55-201ENST00000450522 746 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 RPS23P2-201ENST00000463671 415 ntBASIC5.05□□□□□ -1.6
LINC00346Q8IVM7 AL122020.1-201ENST00000472287 459 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms