Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 FMO7P-201ENST00000436045 768 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 EEF1B2P6-201ENST00000445713 673 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC104634.1-201ENST00000452720 462 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP103-201ENST00000459503 118 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC008814.1-201ENST00000603797 406 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC015914.2-201ENST00000618167 288 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC025262.3-201ENST00000623666 360 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 AC138627.1-204ENST00000641894 765 ntBASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUDCD3Q8IVD9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP433-201ENST00000364491 114 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 OR4K12P-201ENST00000406538 961 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AL356968.2-201ENST00000412769 1257 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 OR2AT2P-201ENST00000413438 905 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AL445665.1-202ENST00000452436 324 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 HLA-DPA3-207ENST00000454398 229 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 RFPL4AP3-201ENST00000515267 345 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP303-201ENST00000516192 130 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 CYCSP22-201ENST00000517555 339 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 TRIM77BP-201ENST00000524985 1119 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC079600.1-201ENST00000550326 297 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AL137246.1-201ENST00000607072 977 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC007683.2-201ENST00000624681 714 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 MTCO1P15-201ENST00000529569 1526 ntBASIC5.13□□□□□ -1.59
NUDCD3Q8IVD9 AC011447.7-201ENST00000624228 1590 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 OR56A4-201ENST00000330728 1209 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MIR137-201ENST00000385223 102 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 OOSP1-201ENST00000398992 1270 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP487-201ENST00000410186 122 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 RPL34P3-201ENST00000421454 338 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AL139148.1-201ENST00000427122 680 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 CDY8P-201ENST00000428380 1279 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 RPL34P6-201ENST00000432390 345 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 CDY20P-201ENST00000447528 1279 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms