Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NDUFB4P12-201ENST00000513465 390 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 STX3-208ENST00000641815 3236 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 RPS12P31-201ENST00000491419 398 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 AC073358.1-201ENST00000505671 684 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 RN7SL802P-201ENST00000577858 299 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 ZYXP1-201ENST00000617638 118 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 RN7SKP280-201ENST00000364196 304 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 MIR589-201ENST00000385238 99 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 HYALP1-201ENST00000417674 1279 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC079064.1-201ENST00000528365 362 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC010632.3-201ENST00000611377 369 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC018816.2-201ENST00000621460 353 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC018628.1-201ENST00000624147 3819 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 MSL3P1-202ENST00000440028 1468 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 VN2R3P-201ENST00000422626 1412 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AL357515.1-201ENST00000402967 542 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 U3.32-201ENST00000408116 212 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC026726.1-201ENST00000512859 601 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 RNU2-30P-201ENST00000516209 141 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC060780.2-201ENST00000589047 198 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 CYP1D1P-201ENST00000416662 1433 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC012213.2-201ENST00000562917 4597 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 GNG5P2-201ENST00000372054 207 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 MED28P5-201ENST00000528254 438 ntBASIC4.01□□□□□ -1.77
VPS13CQ709C8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13CQ709C8 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS13CQ709C8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
VPS13CQ709C8 SNORA70C-201ENST00000384538 135 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 MIR659-201ENST00000384963 97 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 TMBIM7P-201ENST00000418074 855 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 RPL34P6-201ENST00000432390 345 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4□□□□□ -1.77
VPS13CQ709C8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 AL731566.1-201ENST00000620490 1937 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
VPS13CQ709C8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 SOCS5P3-201ENST00000425115 1576 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC4□□□□□ -1.77
VPS13CQ709C8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS13CQ709C8 EIF1P5-201ENST00000585002 234 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 AC010424.2-201ENST00000607594 443 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 AC090220.1-201ENST00000593078 1699 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 SAMMSON-210ENST00000641260 1308 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms