Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC004129.2-201ENST00000457229 287 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RNU1-88P-201ENST00000459274 128 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC023245.1-201ENST00000468501 517 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 OR7E157P-201ENST00000494376 911 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 HSD3BP3-201ENST00000514706 994 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC112198.4-201ENST00000515450 351 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RNU6-1004P-201ENST00000516584 111 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC013701.1-201ENST00000522657 465 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AP002373.2-201ENST00000541631 1060 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC084824.2-201ENST00000548906 345 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC104229.1-201ENST00000561364 255 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC002519.2-203ENST00000567043 837 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AP004607.9-201ENST00000618202 316 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC074140.1-201ENST00000621617 208 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 MIR6806-201ENST00000622141 64 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 MFSD8-239ENST00000641590 2479 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC38Q502W7 AC012254.3-201ENST00000591183 2117 ntBASIC5.95□□□□□ -1.46
CCDC38Q502W7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
CCDC38Q502W7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC008079.2-201ENST00000623543 20396 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL606537.1-201ENST00000607258 2011 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 SELENOWP1-201ENST00000322792 252 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 RNA5SP91-201ENST00000390902 119 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 RNU6-796P-201ENST00000391086 107 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL355143.1-201ENST00000407101 841 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL354890.1-201ENST00000413730 346 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 MRPL50P1-201ENST00000431951 384 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC097463.1-201ENST00000447288 481 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL133244.1-201ENST00000456007 258 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 COX6B1P2-201ENST00000489624 230 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC133963.2-201ENST00000513686 578 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 SNORA31.13-201ENST00000516624 135 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 NPM1P35-201ENST00000533043 868 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC084121.1-201ENST00000533882 835 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC107958.1-201ENST00000556576 290 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 MIR4675-201ENST00000577898 77 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 SS18L2P2-201ENST00000583960 235 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 COX6CP7-201ENST00000597056 208 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 HIRAP1-201ENST00000605318 787 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AL139022.2-201ENST00000606934 443 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC092266.1-201ENST00000610958 165 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC011472.4-201ENST00000615848 491 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms