Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNA5SP43-201ENST00000516559 110 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 RN7SKP260-201ENST00000516907 149 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.06□□□□□ -1.44
GABPAQ06546 BRD9P1-201ENST00000529855 560 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 OR7E128P-201ENST00000532736 1024 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.06□□□□□ -1.44
GABPAQ06546 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.06□□□□□ -1.44
GABPAQ06546 AC105254.2-201ENST00000603636 436 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 AL353662.3-201ENST00000625131 237 ntBASIC6.06□□□□□ -1.44
GABPAQ06546 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
GABPAQ06546 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GABPAQ06546 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GABPAQ06546 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GABPAQ06546 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.05□□□□□ -1.44
GABPAQ06546 MSL3P1-202ENST00000440028 1468 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
GABPAQ06546 OR2AM1P-201ENST00000422137 422 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 MGAT2P2-201ENST00000427194 797 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 AC104837.2-201ENST00000427236 424 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 HSPD1P12-201ENST00000429127 1069 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.05□□□□□ -1.44
GABPAQ06546 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 MED28P3-201ENST00000444288 531 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 COX6B1P5-201ENST00000509843 249 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.05□□□□□ -1.44
GABPAQ06546 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.05□□□□□ -1.44
GABPAQ06546 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GABPAQ06546 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 AL162574.1-201ENST00000615702 950 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.05□□□□□ -1.44
GABPAQ06546 AC005899.7-201ENST00000618199 588 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 AC091953.3-201ENST00000623220 236 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GABPAQ06546 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.05□□□□□ -1.44
GABPAQ06546 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 BCORP1-203ENST00000513194 5093 ntBASIC6.04□□□□□ -1.44
GABPAQ06546 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.04□□□□□ -1.44
GABPAQ06546 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.04□□□□□ -1.44
GABPAQ06546 SUMO2P1-206ENST00000445436 284 ntBASIC6.04□□□□□ -1.44
GABPAQ06546 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.04□□□□□ -1.44
GABPAQ06546 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.04□□□□□ -1.44
GABPAQ06546 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.04□□□□□ -1.44
GABPAQ06546 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.04□□□□□ -1.44
GABPAQ06546 AC021733.2-201ENST00000518830 497 ntBASIC6.04□□□□□ -1.44
GABPAQ06546 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.04□□□□□ -1.44
GABPAQ06546 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.04□□□□□ -1.44
GABPAQ06546 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.04□□□□□ -1.44
GABPAQ06546 AC005000.1-201ENST00000536192 288 ntBASIC6.04□□□□□ -1.44
GABPAQ06546 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.04□□□□□ -1.44
GABPAQ06546 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.04□□□□□ -1.44
GABPAQ06546 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.04□□□□□ -1.44
GABPAQ06546 EIF3FP1-201ENST00000613970 806 ntBASIC6.04□□□□□ -1.44
GABPAQ06546 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.04□□□□□ -1.44
GABPAQ06546 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.04□□□□□ -1.44
GABPAQ06546 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GABPAQ06546 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GABPAQ06546 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GABPAQ06546 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.03□□□□□ -1.44
GABPAQ06546 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.03□□□□□ -1.44
GABPAQ06546 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 RNA5SP87-201ENST00000384155 118 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
GABPAQ06546 SNORA48.4-201ENST00000391089 134 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 CHEK2P3-201ENST00000416118 248 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 KATNBL1P2-201ENST00000433311 835 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 RPL19P16-201ENST00000433839 588 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 RPL7P16-201ENST00000479738 738 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 RPS23P1-201ENST00000491662 432 ntBASIC6.03□□□□□ -1.44
GABPAQ06546 AC021193.1-201ENST00000511607 420 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms