Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RNA5SP231-201ENST00000410496 138 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 RNA5SP146-201ENST00000410743 123 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AC004448.2-201ENST00000422360 586 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AL450023.3-201ENST00000440592 271 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AP006222.1-205ENST00000450734 457 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP1Q04837 AC005008.1-201ENST00000456151 612 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 RPL23AP65-201ENST00000475608 468 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 RNA5SP96-201ENST00000516041 107 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP1Q04837 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP1Q04837 AL049872.1-201ENST00000556323 322 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.27□□□□□ -1.73
SSBP1Q04837 AC079075.1-201ENST00000559543 878 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 ATP5J2P6-201ENST00000565203 266 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AP005432.2-201ENST00000608162 586 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AC234782.5-201ENST00000617723 324 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 AC004232.3-201ENST00000622977 525 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP1Q04837 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
SSBP1Q04837 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP1Q04837 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP1Q04837 MAPK10-303ENST00000641324 3959 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP1Q04837 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.27□□□□□ -1.73
SSBP1Q04837 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SSBP1Q04837 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP1Q04837 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
SSBP1Q04837 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC027290.2-201ENST00000623210 18662 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP1Q04837 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 RN7SKP104-201ENST00000362605 328 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 SNORA66-201ENST00000384792 133 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SSBP1Q04837 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 SEPT7P8-201ENST00000413308 775 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 RPL34P3-201ENST00000421454 338 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.26□□□□□ -1.73
SSBP1Q04837 DSTNP5-201ENST00000427921 523 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC073587.1-201ENST00000447093 876 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC093166.3-201ENST00000448785 303 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 CEACAMP11-201ENST00000455211 583 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 RPL5P16-201ENST00000471467 790 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 RN7SL817P-201ENST00000480777 288 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC021006.1-201ENST00000489849 553 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.26□□□□□ -1.73
SSBP1Q04837 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 STMN1P2-201ENST00000508435 439 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 RNA5SP373-201ENST00000517271 95 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC079600.1-201ENST00000550326 297 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 BLZF2P-201ENST00000553776 1130 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 MRPL45P2-203ENST00000573318 473 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC104687.2-201ENST00000604442 342 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AL353600.1-201ENST00000608148 251 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC008115.3-201ENST00000614874 549 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 uc_338.18-201ENST00000615451 175 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 OR8G7P-201ENST00000616658 848 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP1Q04837 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC106872.5-201ENST00000508856 1416 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SSBP1Q04837 AC022306.1-201ENST00000560489 1562 ntBASIC4.26□□□□□ -1.73
SSBP1Q04837 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.25□□□□□ -1.73
SSBP1Q04837 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSBP1Q04837 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 BMS1P17-202ENST00000416720 316 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 E2F6P2-201ENST00000420708 748 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AL662874.1-201ENST00000426065 230 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 PPIAP13-201ENST00000434706 478 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms