Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.77□□□□□ -1.81
CKS1BP61024 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CKS1BP61024 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 TINAG-203ENST00000370869 782 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 SNORD56.6-201ENST00000384569 71 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC005042.1-201ENST00000393397 800 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC005522.1-201ENST00000395416 346 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 RNU2-50P-201ENST00000410494 143 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 COX5BP7-201ENST00000414780 274 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 PCNPP4-201ENST00000414817 517 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC013268.2-201ENST00000420753 337 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 RPL7P56-201ENST00000429441 717 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC023141.3-201ENST00000436698 278 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC093827.1-201ENST00000480094 861 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 RN7SL570P-201ENST00000484405 292 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 RN7SL362P-201ENST00000494228 267 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC021193.1-201ENST00000511607 420 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC021146.3-201ENST00000511911 260 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 MYL12AP1-201ENST00000518490 515 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 AC006349.1-201ENST00000555526 235 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 HNRNPCP4-201ENST00000571636 900 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AL078601.3-201ENST00000573303 535 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 MIR4776-2-201ENST00000580204 80 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.77□□□□□ -1.81
CKS1BP61024 AC090236.2-201ENST00000587933 1101 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 AP006248.2-201ENST00000623309 592 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CKS1BP61024 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.77□□□□□ -1.81
CKS1BP61024 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.77□□□□□ -1.81
CKS1BP61024 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CKS1BP61024 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CKS1BP61024 PDZK1P1-202ENST00000425209 1350 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.76□□□□□ -1.81
CKS1BP61024 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CKS1BP61024 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CKS1BP61024 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CKS1BP61024 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CKS1BP61024 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CKS1BP61024 SCARNA15-201ENST00000607520 4325 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CKS1BP61024 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.76□□□□□ -1.81
CKS1BP61024 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CKS1BP61024 RN7SKP257-201ENST00000364525 309 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 MIR130A-201ENST00000385274 89 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC3.76□□□□□ -1.81
CKS1BP61024 RN7SKP146-201ENST00000410242 334 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 AL450992.3-201ENST00000413192 568 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 RAC1P3-201ENST00000416129 580 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 NIFKP3-201ENST00000417799 865 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 RPL7P57-201ENST00000423238 740 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 AC007679.3-201ENST00000434035 414 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.76□□□□□ -1.81
CKS1BP61024 NANOGP9-201ENST00000439890 892 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CKS1BP61024 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.76□□□□□ -1.81
CKS1BP61024 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC3.76□□□□□ -1.81
CKS1BP61024 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC3.76□□□□□ -1.81
CKS1BP61024 IFNWP4-201ENST00000453148 294 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 AC009963.3-201ENST00000458090 486 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC3.76□□□□□ -1.81
CKS1BP61024 RPS17P5-201ENST00000498293 408 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 STMN1P2-201ENST00000508435 439 ntBASIC3.76□□□□□ -1.81
CKS1BP61024 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.76□□□□□ -1.81
CKS1BP61024 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.76□□□□□ -1.81
CKS1BP61024 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms