Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN18P56856 RNU6-1331P-201ENST00000363658 106 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CLDN18P56856 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN18P56856 RNU6-729P-201ENST00000384399 107 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN18P56856 DPPA2P3-201ENST00000411853 655 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN18P56856 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 NDUFB4P8-201ENST00000435351 367 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN18P56856 AC005532.2-201ENST00000467154 373 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 AC058823.1-201ENST00000485315 474 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 RN7SL423P-201ENST00000486202 304 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AC015864.1-201ENST00000496512 544 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AC008953.1-201ENST00000497334 318 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN18P56856 AC079064.1-201ENST00000528365 362 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN18P56856 AC127381.1-201ENST00000555979 939 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AL390334.1-201ENST00000556395 450 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 MIR4675-201ENST00000577898 77 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN18P56856 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.8□□□□□ -1.64
CLDN18P56856 AC090527.3-201ENST00000619041 548 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AC018445.2-201ENST00000622987 260 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 AP002505.2-201ENST00000623585 696 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN18P56856 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN18P56856 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN18P56856 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN18P56856 AL031595.2-201ENST00000624215 19071 ntBASIC4.8□□□□□ -1.64
CLDN18P56856 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLDN18P56856 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN18P56856 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN18P56856 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 AC109780.1-201ENST00000451768 1344 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 SAMMSON-213ENST00000641336 1521 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 RNA5SP453-201ENST00000362503 119 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 SNORA5.1-201ENST00000384275 131 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 HSPA8P15-201ENST00000401676 786 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN18P56856 RN7SKP273-201ENST00000411392 314 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 TRGV7-201ENST00000427089 353 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 EEF1B2P5-201ENST00000444820 548 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AURKAPS1-201ENST00000451805 1212 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 OR52Y1P-201ENST00000452418 828 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AC104634.1-201ENST00000452720 462 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 RPS4XP12-201ENST00000461747 709 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AC107015.1-201ENST00000466902 747 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 OR11I1P-201ENST00000486033 954 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN18P56856 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 AC111000.6-201ENST00000514471 709 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN18P56856 OR10G5P-201ENST00000532733 358 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AC068993.1-201ENST00000546724 589 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 HAUS8P1-201ENST00000549005 542 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN18P56856 AC007448.1-201ENST00000582714 234 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AL022394.1-201ENST00000606979 292 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 AC244107.2-201ENST00000611773 76 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 SAMMSON-227ENST00000642114 1199 ntBASIC4.79□□□□□ -1.64
CLDN18P56856 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN18P56856 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN18P56856 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
CLDN18P56856 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms