Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 IFIT1P1-201ENST00000400497 1449 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA1P56159 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 AC079949.2-201ENST00000617117 2933 ntBASIC6.05□□□□□ -1.44
GFRA1P56159 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA1P56159 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.04□□□□□ -1.44
GFRA1P56159 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 OR52B5P-204ENST00000641744 3467 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GFRA1P56159 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GFRA1P56159 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GFRA1P56159 RPL24P4-201ENST00000326586 421 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 Y_RNA.359-201ENST00000365498 102 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 AL033519.1-201ENST00000407266 307 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 USP9YP33-201ENST00000412220 421 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 OR2B8P-201ENST00000432841 938 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC242426.1-201ENST00000435270 960 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 RPL23AP19-201ENST00000436229 369 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 TMX2P1-201ENST00000436507 708 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 NDUFS5P5-201ENST00000437256 321 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 RPL12P49-201ENST00000441100 121 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 RPS7P5-201ENST00000441482 581 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 UBBP5-201ENST00000446970 266 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 RN7SL834P-201ENST00000461450 286 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC006499.5-201ENST00000505037 514 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC122718.2-201ENST00000505325 591 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC048346.1-201ENST00000510247 144 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 RN7SKP31-201ENST00000516354 278 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 OR5AK1P-201ENST00000524837 922 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 AC004232.1-201ENST00000571388 208 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AP005262.1-201ENST00000582646 997 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC245052.7-201ENST00000601161 359 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC012175.1-201ENST00000603755 531 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA1P56159 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 AC010333.3-201ENST00000615100 402 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 AC048341.3-201ENST00000619323 491 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 MIR7854-201ENST00000620068 65 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GFRA1P56159 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 AC092192.1-201ENST00000633154 1018 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 RBPJP6-201ENST00000411556 1431 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 AC011447.7-201ENST00000624228 1590 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 NCOA4P3-201ENST00000513203 1877 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA1P56159 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA1P56159 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GFRA1P56159 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.04□□□□□ -1.44
GFRA1P56159 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA1P56159 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GFRA1P56159 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms