Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
LHX1P48742 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LHX1P48742 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LHX1P48742 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LHX1P48742 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LHX1P48742 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LHX1P48742 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LHX1P48742 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
LHX1P48742 RPL23P2-201ENST00000320371 421 ntBASIC5.61□□□□□ -1.51
LHX1P48742 RNU6-819P-201ENST00000364116 107 ntBASIC5.61□□□□□ -1.51
LHX1P48742 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 MIR600-201ENST00000385007 98 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AC007068.1-201ENST00000396690 844 ntBASIC5.61□□□□□ -1.51
LHX1P48742 U3.36-201ENST00000408418 213 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 DPPA2P3-201ENST00000411853 655 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AL354868.1-201ENST00000417077 482 ntBASIC5.61□□□□□ -1.51
LHX1P48742 VN1R31P-201ENST00000417498 730 ntBASIC5.61□□□□□ -1.51
LHX1P48742 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.61□□□□□ -1.51
LHX1P48742 BX276092.6-201ENST00000430476 250 ntBASIC5.61□□□□□ -1.51
LHX1P48742 Z85994.2-201ENST00000434327 452 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AL161722.2-201ENST00000434731 981 ntBASIC5.61□□□□□ -1.51
LHX1P48742 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.61□□□□□ -1.51
LHX1P48742 NDUFA5P8-201ENST00000449019 346 ntBASIC5.61□□□□□ -1.51
LHX1P48742 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.61□□□□□ -1.51
LHX1P48742 BX276092.8-201ENST00000455722 250 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AC009127.1-201ENST00000467090 155 ntBASIC5.61□□□□□ -1.51
LHX1P48742 CBX1P5-201ENST00000475330 559 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AC093827.1-201ENST00000480094 861 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AC008953.1-201ENST00000497334 318 ntBASIC5.61□□□□□ -1.51
LHX1P48742 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.61□□□□□ -1.51
LHX1P48742 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.61□□□□□ -1.51
LHX1P48742 NPM1P21-201ENST00000513394 762 ntBASIC5.61□□□□□ -1.51
LHX1P48742 OR4A46P-201ENST00000527255 933 ntBASIC5.61□□□□□ -1.51
LHX1P48742 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 AC134349.2-201ENST00000535136 910 ntBASIC5.61□□□□□ -1.51
LHX1P48742 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.61□□□□□ -1.51
LHX1P48742 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.61□□□□□ -1.51
LHX1P48742 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.61□□□□□ -1.51
LHX1P48742 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 AL118556.2-201ENST00000614375 824 ntBASIC5.61□□□□□ -1.51
LHX1P48742 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LHX1P48742 AC135068.12-201ENST00000637370 931 ntBASIC5.61□□□□□ -1.51
LHX1P48742 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LHX1P48742 AC004158.1-201ENST00000564508 4319 ntBASIC5.61□□□□□ -1.51
LHX1P48742 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LHX1P48742 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
LHX1P48742 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LHX1P48742 MRRFP1-201ENST00000435941 1675 ntBASIC5.6□□□□□ -1.51
LHX1P48742 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 U3.3-201ENST00000362986 216 ntBASIC5.6□□□□□ -1.51
LHX1P48742 RNA5SP507-201ENST00000363603 121 ntBASIC5.6□□□□□ -1.51
LHX1P48742 U8.4-201ENST00000363626 134 ntBASIC5.6□□□□□ -1.51
LHX1P48742 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 SNORA70.6-201ENST00000383934 134 ntBASIC5.6□□□□□ -1.51
LHX1P48742 MIR765-201ENST00000390226 114 ntBASIC5.6□□□□□ -1.51
LHX1P48742 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.6□□□□□ -1.51
LHX1P48742 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.6□□□□□ -1.51
LHX1P48742 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.6□□□□□ -1.51
LHX1P48742 SETP9-201ENST00000423837 832 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 AC009784.1-201ENST00000426484 460 ntBASIC5.6□□□□□ -1.51
LHX1P48742 BRWD1P3-201ENST00000428816 390 ntBASIC5.6□□□□□ -1.51
LHX1P48742 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.6□□□□□ -1.51
LHX1P48742 OR5M14P-201ENST00000506803 618 ntBASIC5.6□□□□□ -1.51
LHX1P48742 SNORA70.17-201ENST00000516449 133 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.6□□□□□ -1.51
LHX1P48742 HMGN2P6-201ENST00000551091 273 ntBASIC5.6□□□□□ -1.51
LHX1P48742 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.6□□□□□ -1.51
LHX1P48742 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.6□□□□□ -1.51
LHX1P48742 AC007448.1-201ENST00000582714 234 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 AC022387.2-201ENST00000604050 448 ntBASIC5.6□□□□□ -1.51
LHX1P48742 TAS2R6P-201ENST00000605022 826 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AC010632.3-201ENST00000611377 369 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AC009163.6-201ENST00000612367 342 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AC037198.3-201ENST00000616754 526 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AC099494.2-201ENST00000623371 978 ntBASIC5.6□□□□□ -1.51
LHX1P48742 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.6□□□□□ -1.51
LHX1P48742 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LHX1P48742 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX1P48742 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX1P48742 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms