Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MED28P3-201ENST00000444288 531 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN9P43378 RPL23AP73-201ENST00000492507 471 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN9P43378 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.73□□□□□ -1.49
PTPN9P43378 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.73□□□□□ -1.49
PTPN9P43378 AC093763.2-201ENST00000505334 1223 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 AC010468.3-201ENST00000508225 458 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN9P43378 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.73□□□□□ -1.49
PTPN9P43378 MTND5P21-201ENST00000531961 522 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN9P43378 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN9P43378 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN9P43378 AC126175.1-201ENST00000617041 758 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 RNA5SP439-201ENST00000617595 124 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 uc_338.7-201ENST00000621834 124 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 AC132068.1-201ENST00000623805 459 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN9P43378 AC103703.1-201ENST00000634783 663 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.73□□□□□ -1.49
PTPN9P43378 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN9P43378 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.73□□□□□ -1.49
PTPN9P43378 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN9P43378 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC100757.1-201ENST00000616872 1835 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN9P43378 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 AC004656.1-201ENST00000568479 4951 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN9P43378 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 PPIAP9-201ENST00000403866 498 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 RN7SKP293-201ENST00000411389 296 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC007563.3-201ENST00000433233 371 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 RPL12P18-201ENST00000437175 325 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AL513321.1-201ENST00000441175 761 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 OR9N1P-202ENST00000494289 481 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC093770.1-201ENST00000511559 571 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 MTATP6P1-201ENST00000514057 681 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 SNORA76.2-201ENST00000517095 137 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC103833.1-201ENST00000517442 172 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC020937.1-201ENST00000519677 1013 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN9P43378 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN9P43378 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN9P43378 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 AC093510.2-201ENST00000562820 896 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC015720.2-201ENST00000567709 334 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 MIR7853-201ENST00000584820 132 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC110792.4-201ENST00000609843 298 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AL163051.2-201ENST00000618976 735 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AC022306.3-201ENST00000619930 550 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC073869.8-201ENST00000641806 335 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 DDX18P6-201ENST00000450119 1997 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN9P43378 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 ADAM24P-201ENST00000398655 2101 ntBASIC5.72□□□□□ -1.49
PTPN9P43378 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN9P43378 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN9P43378 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN9P43378 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN9P43378 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTPN9P43378 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.71□□□□□ -1.49
PTPN9P43378 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.71□□□□□ -1.49
PTPN9P43378 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTPN9P43378 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTPN9P43378 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN9P43378 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms