Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 OR10J6P-201ENST00000289731 930 ntBASIC5.74□□□□□ -1.49
SSR1P43307 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 RPS24P12-201ENST00000402084 394 ntBASIC5.74□□□□□ -1.49
SSR1P43307 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 AC092570.3-201ENST00000420113 693 ntBASIC5.74□□□□□ -1.49
SSR1P43307 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.74□□□□□ -1.49
SSR1P43307 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
SSR1P43307 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 TAAR4P-201ENST00000454843 1039 ntBASIC5.74□□□□□ -1.49
SSR1P43307 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 AC094085.1-201ENST00000468914 584 ntBASIC5.74□□□□□ -1.49
SSR1P43307 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.74□□□□□ -1.49
SSR1P43307 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.74□□□□□ -1.49
SSR1P43307 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.74□□□□□ -1.49
SSR1P43307 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 AC109464.1-201ENST00000511091 819 ntBASIC5.74□□□□□ -1.49
SSR1P43307 AC091912.1-201ENST00000511351 248 ntBASIC5.74□□□□□ -1.49
SSR1P43307 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSR1P43307 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSR1P43307 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.74□□□□□ -1.49
SSR1P43307 AP000769.2-201ENST00000602344 396 ntBASIC5.74□□□□□ -1.49
SSR1P43307 PPATP2-201ENST00000605635 508 ntBASIC5.74□□□□□ -1.49
SSR1P43307 AC108865.2-201ENST00000606881 432 ntBASIC5.74□□□□□ -1.49
SSR1P43307 AL023881.1-201ENST00000621088 301 ntBASIC5.74□□□□□ -1.49
SSR1P43307 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.74□□□□□ -1.49
SSR1P43307 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.74□□□□□ -1.49
SSR1P43307 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.74□□□□□ -1.49
SSR1P43307 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.74□□□□□ -1.49
SSR1P43307 AC008691.1-209ENST00000642094 814 ntBASIC5.74□□□□□ -1.49
SSR1P43307 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.74□□□□□ -1.49
SSR1P43307 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
SSR1P43307 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSR1P43307 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSR1P43307 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 CR382285.2-201ENST00000624662 1495 ntBASIC5.73□□□□□ -1.49
SSR1P43307 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 GPS2P1-201ENST00000411761 986 ntBASIC5.73□□□□□ -1.49
SSR1P43307 SMC4P1-201ENST00000414479 527 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.73□□□□□ -1.49
SSR1P43307 RPL34P3-201ENST00000421454 338 ntBASIC5.73□□□□□ -1.49
SSR1P43307 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.73□□□□□ -1.49
SSR1P43307 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 FMO7P-201ENST00000436045 768 ntBASIC5.73□□□□□ -1.49
SSR1P43307 Z84478.1-201ENST00000438230 1219 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AC073909.1-201ENST00000447112 999 ntBASIC5.73□□□□□ -1.49
SSR1P43307 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 AC021193.1-201ENST00000511607 420 ntBASIC5.73□□□□□ -1.49
SSR1P43307 HMGN1P9-201ENST00000515212 298 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AC112191.2-201ENST00000522428 333 ntBASIC5.73□□□□□ -1.49
SSR1P43307 OR8G3P-201ENST00000533406 921 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.73□□□□□ -1.49
SSR1P43307 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.73□□□□□ -1.49
SSR1P43307 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.73□□□□□ -1.49
SSR1P43307 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.73□□□□□ -1.49
SSR1P43307 AC005726.4-201ENST00000582858 458 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.73□□□□□ -1.49
SSR1P43307 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.73□□□□□ -1.49
SSR1P43307 AC100767.2-201ENST00000604840 693 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AL359742.1-201ENST00000622497 540 ntBASIC5.73□□□□□ -1.49
SSR1P43307 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 SMG1P6-201ENST00000532337 2930 ntBASIC5.73□□□□□ -1.49
SSR1P43307 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSR1P43307 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.73□□□□□ -1.49
SSR1P43307 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSR1P43307 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SSR1P43307 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SSR1P43307 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms