Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
RFC4P35249 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 ST13P12-201ENST00000508958 1094 ntBASIC6.56□□□□□ -1.36
RFC4P35249 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.56□□□□□ -1.36
RFC4P35249 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.56□□□□□ -1.36
RFC4P35249 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.56□□□□□ -1.36
RFC4P35249 AL034374.2-201ENST00000605281 548 ntBASIC6.56□□□□□ -1.36
RFC4P35249 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 OR9K1P-202ENST00000641111 3217 ntBASIC6.56□□□□□ -1.36
RFC4P35249 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFC4P35249 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFC4P35249 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.56□□□□□ -1.36
RFC4P35249 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.56□□□□□ -1.36
RFC4P35249 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 ZNF402P-201ENST00000404435 3100 ntBASIC6.55□□□□□ -1.36
RFC4P35249 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.55□□□□□ -1.36
RFC4P35249 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 AL034549.2-201ENST00000618285 3373 ntBASIC6.55□□□□□ -1.36
RFC4P35249 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFC4P35249 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.55□□□□□ -1.36
RFC4P35249 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.55□□□□□ -1.36
RFC4P35249 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.55□□□□□ -1.36
RFC4P35249 AC009480.2-201ENST00000422916 432 ntBASIC6.55□□□□□ -1.36
RFC4P35249 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.55□□□□□ -1.36
RFC4P35249 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.55□□□□□ -1.36
RFC4P35249 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFC4P35249 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFC4P35249 RN7SL319P-201ENST00000480656 221 ntBASIC6.55□□□□□ -1.36
RFC4P35249 AC093720.1-201ENST00000505681 714 ntBASIC6.55□□□□□ -1.36
RFC4P35249 SCARNA20.4-201ENST00000516969 131 ntBASIC6.55□□□□□ -1.36
RFC4P35249 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.55□□□□□ -1.36
RFC4P35249 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.55□□□□□ -1.36
RFC4P35249 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 AC060780.2-201ENST00000589047 198 ntBASIC6.55□□□□□ -1.36
RFC4P35249 AC009237.13-201ENST00000603193 276 ntBASIC6.55□□□□□ -1.36
RFC4P35249 AC244107.2-201ENST00000611773 76 ntBASIC6.55□□□□□ -1.36
RFC4P35249 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.55□□□□□ -1.36
RFC4P35249 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.55□□□□□ -1.36
RFC4P35249 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.55□□□□□ -1.36
RFC4P35249 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.55□□□□□ -1.36
RFC4P35249 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFC4P35249 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFC4P35249 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.54□□□□□ -1.36
RFC4P35249 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.54□□□□□ -1.36
RFC4P35249 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RFC4P35249 RPL32P3-201ENST00000359025 275 ntBASIC6.54□□□□□ -1.36
RFC4P35249 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 P2RY10P2-201ENST00000416730 913 ntBASIC6.54□□□□□ -1.36
RFC4P35249 RPL12P43-201ENST00000420608 499 ntBASIC6.54□□□□□ -1.36
RFC4P35249 AL137845.2-201ENST00000444292 988 ntBASIC6.54□□□□□ -1.36
RFC4P35249 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.54□□□□□ -1.36
RFC4P35249 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.54□□□□□ -1.36
RFC4P35249 AC023389.2-201ENST00000580031 955 ntBASIC6.54□□□□□ -1.36
RFC4P35249 SS18L2P2-201ENST00000583960 235 ntBASIC6.54□□□□□ -1.36
RFC4P35249 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 AC105254.2-201ENST00000603636 436 ntBASIC6.54□□□□□ -1.36
RFC4P35249 AL162431.4-201ENST00000604674 411 ntBASIC6.54□□□□□ -1.36
RFC4P35249 AP005131.7-201ENST00000610087 611 ntBASIC6.54□□□□□ -1.36
RFC4P35249 uc_338.7-201ENST00000621834 124 ntBASIC6.54□□□□□ -1.36
RFC4P35249 AC016717.3-201ENST00000624730 554 ntBASIC6.54□□□□□ -1.36
RFC4P35249 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.54□□□□□ -1.36
RFC4P35249 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.54□□□□□ -1.36
RFC4P35249 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFC4P35249 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.54□□□□□ -1.36
RFC4P35249 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.53□□□□□ -1.36
RFC4P35249 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.53□□□□□ -1.36
RFC4P35249 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFC4P35249 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms