Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC034205.1-201ENST00000520621 638 ntBASIC6.48□□□□□ -1.37
TM4SF1P30408 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.48□□□□□ -1.37
TM4SF1P30408 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.48□□□□□ -1.37
TM4SF1P30408 AC010547.7-201ENST00000570323 333 ntBASIC6.48□□□□□ -1.37
TM4SF1P30408 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.48□□□□□ -1.37
TM4SF1P30408 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.48□□□□□ -1.37
TM4SF1P30408 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.48□□□□□ -1.37
TM4SF1P30408 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.48□□□□□ -1.37
TM4SF1P30408 AC016717.3-201ENST00000624730 554 ntBASIC6.48□□□□□ -1.37
TM4SF1P30408 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM4SF1P30408 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM4SF1P30408 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.48□□□□□ -1.37
TM4SF1P30408 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.48□□□□□ -1.37
TM4SF1P30408 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 AC232271.1-201ENST00000602455 2715 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TM4SF1P30408 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 SNORD56.6-201ENST00000384569 71 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.47□□□□□ -1.37
TM4SF1P30408 AL359265.2-201ENST00000434367 631 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 MTND3P6-201ENST00000485242 339 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.47□□□□□ -1.37
TM4SF1P30408 ST13P12-201ENST00000508958 1094 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 AC006427.1-201ENST00000514359 712 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.47□□□□□ -1.37
TM4SF1P30408 OR4A43P-201ENST00000532938 908 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.47□□□□□ -1.37
TM4SF1P30408 AC136624.4-201ENST00000573044 370 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 MIR3667-201ENST00000581025 74 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 AP005432.2-201ENST00000608162 586 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 AL596275.2-208ENST00000641192 594 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF1P30408 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF1P30408 AL929601.4-201ENST00000613011 1341 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 BX284613.1-201ENST00000452221 1641 ntBASIC6.47□□□□□ -1.37
TM4SF1P30408 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM4SF1P30408 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM4SF1P30408 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
TM4SF1P30408 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF1P30408 RNA5SP191-201ENST00000362585 102 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 RNU4-23P-201ENST00000362839 140 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TM4SF1P30408 RNU6-316P-201ENST00000391027 107 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 PPIAP9-201ENST00000403866 498 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF1P30408 AC004074.1-201ENST00000421810 1063 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF1P30408 RPL34P27-201ENST00000428810 349 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF1P30408 AC104849.1-201ENST00000462623 405 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 RPS23P7-201ENST00000466210 444 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC103987.1-201ENST00000473394 348 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC093720.1-201ENST00000505681 714 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC138409.2-202ENST00000507274 458 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF1P30408 MTND2P17-201ENST00000550281 688 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TM4SF1P30408 NPM1P5-201ENST00000557228 838 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC100814.1-201ENST00000606963 623 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 AC099654.6-201ENST00000636487 512 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 AC015799.1-201ENST00000622996 3122 ntBASIC6.46□□□□□ -1.38
TM4SF1P30408 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF1P30408 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TM4SF1P30408 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF1P30408 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF1P30408 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF1P30408 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM4SF1P30408 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.45□□□□□ -1.38
TM4SF1P30408 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.45□□□□□ -1.38
TM4SF1P30408 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.45□□□□□ -1.38
TM4SF1P30408 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM4SF1P30408 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TM4SF1P30408 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM4SF1P30408 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM4SF1P30408 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TM4SF1P30408 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TM4SF1P30408 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.45□□□□□ -1.38
TM4SF1P30408 AC073465.2-201ENST00000440938 498 ntBASIC6.45□□□□□ -1.38
TM4SF1P30408 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.45□□□□□ -1.38
TM4SF1P30408 RBMY2TP-201ENST00000451162 947 ntBASIC6.45□□□□□ -1.38
TM4SF1P30408 OR6C72P-201ENST00000451403 892 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms