Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL356274.1-201ENST00000617064 410 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 RNU6-368P-201ENST00000620928 107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.8□□□□□ -1.32
CNGA1P29973 AL137067.2-201ENST00000621202 131 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.8□□□□□ -1.32
CNGA1P29973 RNU6-538P-201ENST00000622329 107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC004836.1-201ENST00000623032 634 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC010435.1-201ENST00000623353 1177 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.8□□□□□ -1.32
CNGA1P29973 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNGA1P29973 AC092692.1-201ENST00000623625 2595 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.8□□□□□ -1.32
CNGA1P29973 AOX3P-204ENST00000491025 2107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC096921.2-201ENST00000561507 1916 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC006511.3-201ENST00000624929 1783 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
CNGA1P29973 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.79□□□□□ -1.32
CNGA1P29973 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.79□□□□□ -1.32
CNGA1P29973 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.79□□□□□ -1.32
CNGA1P29973 RNA5SP46-201ENST00000362370 120 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 RNA5SP394-201ENST00000364216 119 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 RNU105B-201ENST00000364478 208 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.79□□□□□ -1.32
CNGA1P29973 MIR137-201ENST00000385223 102 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AP003170.5-201ENST00000397185 335 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.79□□□□□ -1.32
CNGA1P29973 RPS15AP30-201ENST00000420976 390 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC007394.1-201ENST00000421941 531 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC007568.1-201ENST00000422912 471 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.79□□□□□ -1.32
CNGA1P29973 AL133445.1-201ENST00000467051 452 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC023245.1-201ENST00000468501 517 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 AC138866.2-201ENST00000508650 584 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.79□□□□□ -1.32
CNGA1P29973 AP006245.2-201ENST00000522004 300 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AP001804.1-201ENST00000526868 919 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.79□□□□□ -1.32
CNGA1P29973 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.79□□□□□ -1.32
CNGA1P29973 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.79□□□□□ -1.32
CNGA1P29973 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.79□□□□□ -1.32
CNGA1P29973 AL135786.2-201ENST00000608422 615 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.79□□□□□ -1.32
CNGA1P29973 MIR6798-201ENST00000612887 67 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.79□□□□□ -1.32
CNGA1P29973 AC132825.7-201ENST00000638744 335 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AL132640.2-201ENST00000559968 1698 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 HDAC1P2-201ENST00000453661 1398 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 AC017007.4-201ENST00000503353 1352 ntBASIC6.79□□□□□ -1.32
CNGA1P29973 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.79□□□□□ -1.32
CNGA1P29973 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
CNGA1P29973 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.79□□□□□ -1.32
CNGA1P29973 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CNGA1P29973 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CNGA1P29973 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.78□□□□□ -1.32
CNGA1P29973 NCOA4P2-201ENST00000340589 1813 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.78□□□□□ -1.32
CNGA1P29973 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.78□□□□□ -1.32
CNGA1P29973 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CNGA1P29973 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 SELENOWP1-201ENST00000322792 252 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 RNU4-31P-201ENST00000384211 141 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 RNU6-729P-201ENST00000384399 107 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 SPTLC1P2-201ENST00000407089 121 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 RPS3AP25-201ENST00000411660 793 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.78□□□□□ -1.32
CNGA1P29973 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.78□□□□□ -1.32
CNGA1P29973 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 AL662874.1-201ENST00000426065 230 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 DEFA9P-201ENST00000433042 285 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CNGA1P29973 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.78□□□□□ -1.32
CNGA1P29973 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.78□□□□□ -1.32
CNGA1P29973 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.78□□□□□ -1.32
CNGA1P29973 AL096803.2-201ENST00000450032 677 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 LRRC37A14P-201ENST00000452297 462 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AC073594.1-201ENST00000462065 364 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AC091544.1-201ENST00000484702 348 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AC073610.1-201ENST00000489971 396 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AC108693.1-201ENST00000496068 432 ntBASIC6.78□□□□□ -1.32
CNGA1P29973 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms