Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 AC239803.2-201ENST00000610161 430 ntBASIC4.61□□□□□ -1.67
USF1P22415 AL356752.1-201ENST00000615844 593 ntBASIC4.61□□□□□ -1.67
USF1P22415 AL353796.1-201ENST00000561542 3241 ntBASIC4.61□□□□□ -1.67
USF1P22415 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.61□□□□□ -1.67
USF1P22415 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
USF1P22415 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
USF1P22415 AC131971.1-201ENST00000332881 1482 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.61□□□□□ -1.67
USF1P22415 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
USF1P22415 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 MIR585-201ENST00000384887 94 ntBASIC4.6□□□□□ -1.67
USF1P22415 RNA5SP339-201ENST00000390987 122 ntBASIC4.6□□□□□ -1.67
USF1P22415 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.6□□□□□ -1.67
USF1P22415 AC108075.1-201ENST00000424692 529 ntBASIC4.6□□□□□ -1.67
USF1P22415 DSTNP5-201ENST00000427921 523 ntBASIC4.6□□□□□ -1.67
USF1P22415 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 AP002371.1-201ENST00000463604 433 ntBASIC4.6□□□□□ -1.67
USF1P22415 PSAT1P4-201ENST00000466500 526 ntBASIC4.6□□□□□ -1.67
USF1P22415 CBX1P5-201ENST00000475330 559 ntBASIC4.6□□□□□ -1.67
USF1P22415 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 ATP5LP5-201ENST00000483050 299 ntBASIC4.6□□□□□ -1.67
USF1P22415 RN7SL97P-201ENST00000486780 299 ntBASIC4.6□□□□□ -1.67
USF1P22415 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.6□□□□□ -1.67
USF1P22415 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 RFPL4AP3-201ENST00000515267 345 ntBASIC4.6□□□□□ -1.67
USF1P22415 SCARNA16.4-201ENST00000516956 187 ntBASIC4.6□□□□□ -1.67
USF1P22415 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.6□□□□□ -1.67
USF1P22415 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.6□□□□□ -1.67
USF1P22415 PMS2P3-207ENST00000529061 717 ntBASIC4.6□□□□□ -1.67
USF1P22415 OR4A43P-201ENST00000532938 908 ntBASIC4.6□□□□□ -1.67
USF1P22415 AC008126.1-201ENST00000549019 480 ntBASIC4.6□□□□□ -1.67
USF1P22415 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.6□□□□□ -1.67
USF1P22415 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.6□□□□□ -1.67
USF1P22415 AC234775.3-201ENST00000564612 656 ntBASIC4.6□□□□□ -1.67
USF1P22415 MIR3691-201ENST00000578066 90 ntBASIC4.6□□□□□ -1.67
USF1P22415 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.6□□□□□ -1.67
USF1P22415 AL713998.2-201ENST00000604538 1198 ntBASIC4.6□□□□□ -1.67
USF1P22415 AC096586.2-201ENST00000610260 441 ntBASIC4.6□□□□□ -1.67
USF1P22415 AL122125.1-201ENST00000616999 600 ntBASIC4.6□□□□□ -1.67
USF1P22415 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USF1P22415 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
USF1P22415 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 AC112198.2-201ENST00000426589 6996 ntBASIC4.6□□□□□ -1.67
USF1P22415 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USF1P22415 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
USF1P22415 AC011933.2-201ENST00000578539 2790 ntBASIC4.59□□□□□ -1.67
USF1P22415 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.59□□□□□ -1.67
USF1P22415 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USF1P22415 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USF1P22415 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
USF1P22415 AC092681.1-201ENST00000297369 291 ntBASIC4.59□□□□□ -1.67
USF1P22415 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USF1P22415 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USF1P22415 RN7SKP185-201ENST00000362813 326 ntBASIC4.59□□□□□ -1.67
USF1P22415 RNU1-146P-201ENST00000364015 165 ntBASIC4.59□□□□□ -1.67
USF1P22415 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.59□□□□□ -1.67
USF1P22415 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
USF1P22415 MIR550A3-201ENST00000390735 95 ntBASIC4.59□□□□□ -1.67
USF1P22415 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USF1P22415 NPM1P18-201ENST00000434232 732 ntBASIC4.59□□□□□ -1.67
USF1P22415 SERPINA7P1-201ENST00000443077 631 ntBASIC4.59□□□□□ -1.67
USF1P22415 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.59□□□□□ -1.67
USF1P22415 SUMO2P1-206ENST00000445436 284 ntBASIC4.59□□□□□ -1.67
USF1P22415 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USF1P22415 AC023271.1-201ENST00000445936 1090 ntBASIC4.59□□□□□ -1.67
USF1P22415 TRBV8-1-201ENST00000481590 279 ntBASIC4.59□□□□□ -1.67
USF1P22415 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.59□□□□□ -1.67
USF1P22415 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms