Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC127024.5-201ENST00000580085 462 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 SDR42E1P1-201ENST00000611327 477 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
XRCC1P18887 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
XRCC1P18887 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
XRCC1P18887 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 AC007342.5-201ENST00000571340 2142 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 CASC19-255ENST00000641733 1385 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 AC233968.1-201ENST00000611212 1300 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
XRCC1P18887 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.28□□□□□ -1.56
XRCC1P18887 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.28□□□□□ -1.56
XRCC1P18887 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
XRCC1P18887 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 OR1L6-202ENST00000373684 1044 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 SNORD56.6-201ENST00000384569 71 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
XRCC1P18887 RPL12P9-201ENST00000412942 488 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.28□□□□□ -1.56
XRCC1P18887 COX5BP7-201ENST00000414780 274 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 HSPD1P12-201ENST00000429127 1069 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 FAM96AP1-201ENST00000430879 482 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 FTLP19-201ENST00000433300 394 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 OR52B5P-201ENST00000435337 951 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 CNOT7P2-201ENST00000441051 832 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.28□□□□□ -1.56
XRCC1P18887 GAPDHP25-201ENST00000447061 1001 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.28□□□□□ -1.56
XRCC1P18887 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
XRCC1P18887 RPS4XP1-201ENST00000482189 787 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 AL049874.2-201ENST00000492636 288 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.28□□□□□ -1.56
XRCC1P18887 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.28□□□□□ -1.56
XRCC1P18887 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.28□□□□□ -1.56
XRCC1P18887 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.28□□□□□ -1.56
XRCC1P18887 AC109583.2-201ENST00000617367 129 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 OR52B5P-202ENST00000641118 1110 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 AC073869.8-201ENST00000641806 335 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
XRCC1P18887 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 AL603750.1-201ENST00000624216 1717 ntBASIC5.28□□□□□ -1.56
XRCC1P18887 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
XRCC1P18887 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
XRCC1P18887 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
XRCC1P18887 HSPA8P14-201ENST00000552265 1805 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 AL360270.2-201ENST00000562952 5985 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.27□□□□□ -1.57
XRCC1P18887 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.27□□□□□ -1.57
XRCC1P18887 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.27□□□□□ -1.57
XRCC1P18887 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.27□□□□□ -1.57
XRCC1P18887 SNORA67-201ENST00000384423 137 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 MIR105-2-201ENST00000385083 81 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 RNA5SP487-201ENST00000410186 122 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 RNU4-34P-201ENST00000410431 124 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 RN7SKP278-201ENST00000410504 342 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 AL445213.1-201ENST00000412589 747 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.27□□□□□ -1.57
XRCC1P18887 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.27□□□□□ -1.57
XRCC1P18887 AC093655.2-201ENST00000425735 631 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
XRCC1P18887 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.27□□□□□ -1.57
XRCC1P18887 RPL19P16-201ENST00000433839 588 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.27□□□□□ -1.57
XRCC1P18887 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.27□□□□□ -1.57
XRCC1P18887 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.27□□□□□ -1.57
XRCC1P18887 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
XRCC1P18887 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.27□□□□□ -1.57
XRCC1P18887 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.27□□□□□ -1.57
XRCC1P18887 AC079841.1-201ENST00000481228 950 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 RN7SL727P-201ENST00000482164 296 ntBASIC5.27□□□□□ -1.57
XRCC1P18887 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.27□□□□□ -1.57
XRCC1P18887 IMPA1P1-201ENST00000510718 842 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms