Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 RPL7AP69-201ENST00000595306 806 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.34□□□□□ -1.23
LIG1P18858 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.34□□□□□ -1.23
LIG1P18858 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.34□□□□□ -1.23
LIG1P18858 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 AL162574.1-201ENST00000615702 950 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AC025588.4-201ENST00000615802 908 ntBASIC7.34□□□□□ -1.23
LIG1P18858 U6atac.1-201ENST00000616025 117 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AC121761.2-201ENST00000617300 689 ntBASIC7.34□□□□□ -1.23
LIG1P18858 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 AC007494.3-201ENST00000624660 743 ntBASIC7.34□□□□□ -1.23
LIG1P18858 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 AC068213.1-201ENST00000625124 226 ntBASIC7.34□□□□□ -1.23
LIG1P18858 AL132640.3-201ENST00000630473 177 ntBASIC7.34□□□□□ -1.23
LIG1P18858 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 FP325313.1-201ENST00000638228 703 ntBASIC7.34□□□□□ -1.23
LIG1P18858 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 AC005725.1-201ENST00000577346 2607 ntBASIC7.34□□□□□ -1.23
LIG1P18858 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.34□□□□□ -1.23
LIG1P18858 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LIG1P18858 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
LIG1P18858 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 SGO1P2-201ENST00000429458 1589 ntBASIC7.33□□□□□ -1.24
LIG1P18858 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.33□□□□□ -1.24
LIG1P18858 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.33□□□□□ -1.24
LIG1P18858 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.33□□□□□ -1.24
LIG1P18858 AC010894.1-201ENST00000313760 361 ntBASIC7.33□□□□□ -1.24
LIG1P18858 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 Y_RNA.3-201ENST00000362331 103 ntBASIC7.33□□□□□ -1.24
LIG1P18858 RN7SKP237-201ENST00000364663 301 ntBASIC7.33□□□□□ -1.24
LIG1P18858 SNORD116.1-201ENST00000365628 92 ntBASIC7.33□□□□□ -1.24
LIG1P18858 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 MIR191-201ENST00000384873 92 ntBASIC7.33□□□□□ -1.24
LIG1P18858 MCTS2P-201ENST00000394552 546 ntBASIC7.33□□□□□ -1.24
LIG1P18858 UBTFL2-201ENST00000411859 1191 ntBASIC7.33□□□□□ -1.24
LIG1P18858 FCF1P9-201ENST00000412546 282 ntBASIC7.33□□□□□ -1.24
LIG1P18858 RANP6-201ENST00000413691 644 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.33□□□□□ -1.24
LIG1P18858 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.33□□□□□ -1.24
LIG1P18858 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 KF459542.1-201ENST00000450908 553 ntBASIC7.33□□□□□ -1.24
LIG1P18858 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 AC233982.1-201ENST00000451247 436 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AC244505.3-201ENST00000454598 187 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 SLC25A51P1-201ENST00000468432 871 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AC022206.1-201ENST00000495947 347 ntBASIC7.33□□□□□ -1.24
LIG1P18858 OR5H4P-201ENST00000510851 923 ntBASIC7.33□□□□□ -1.24
LIG1P18858 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 C1GALT1P3-201ENST00000522049 819 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.33□□□□□ -1.24
LIG1P18858 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.33□□□□□ -1.24
LIG1P18858 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.33□□□□□ -1.24
LIG1P18858 EIF1P4-201ENST00000572664 335 ntBASIC7.33□□□□□ -1.24
LIG1P18858 MIR3915-201ENST00000578518 97 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.33□□□□□ -1.24
LIG1P18858 AL136363.2-201ENST00000604173 851 ntBASIC7.33□□□□□ -1.24
LIG1P18858 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AL031775.1-201ENST00000607014 887 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AL035661.1-201ENST00000620459 1144 ntBASIC7.33□□□□□ -1.24
LIG1P18858 AL356121.2-201ENST00000624715 780 ntBASIC7.33□□□□□ -1.24
LIG1P18858 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LIG1P18858 SAGE3P-201ENST00000619800 1635 ntBASIC7.33□□□□□ -1.24
LIG1P18858 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
LIG1P18858 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
LIG1P18858 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.32□□□□□ -1.24
LIG1P18858 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LIG1P18858 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LIG1P18858 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms