Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 OR4A43P-201ENST00000532938 908 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC027281.1-201ENST00000574178 758 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.66□□□□□ -1.5
PDGFRAP16234 AC244107.2-201ENST00000611773 76 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 RNA5SP439-201ENST00000617595 124 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 AF117829.2-201ENST00000619538 361 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDGFRAP16234 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 CIR1P2-201ENST00000514821 1342 ntBASIC5.66□□□□□ -1.5
PDGFRAP16234 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFRAP16234 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFRAP16234 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFRAP16234 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFRAP16234 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFRAP16234 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFRAP16234 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFRAP16234 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDGFRAP16234 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDGFRAP16234 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDGFRAP16234 RNU1-77P-201ENST00000390868 162 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 GPS2P1-201ENST00000411761 986 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 RPL35AP24-201ENST00000413846 330 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 TRIM60P17-201ENST00000415181 719 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFRAP16234 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.65□□□□□ -1.5
PDGFRAP16234 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFRAP16234 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFRAP16234 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 RPL12P18-201ENST00000437175 325 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.65□□□□□ -1.5
PDGFRAP16234 UBA52P7-201ENST00000486088 380 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AC021193.1-201ENST00000511607 420 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 BLZF2P-201ENST00000553776 1130 ntBASIC5.65□□□□□ -1.5
PDGFRAP16234 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFRAP16234 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFRAP16234 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDGFRAP16234 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PDGFRAP16234 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.65□□□□□ -1.51
PDGFRAP16234 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.65□□□□□ -1.51
PDGFRAP16234 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PDGFRAP16234 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.51
PDGFRAP16234 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFRAP16234 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PDGFRAP16234 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDGFRAP16234 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AL022311.1-201ENST00000623726 19416 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 MRRFP1-201ENST00000435941 1675 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 MIR133A2-201ENST00000347538 102 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 OR13C3-201ENST00000374781 1108 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AC009804.1-201ENST00000400949 179 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 CYCSP12-201ENST00000437729 300 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AL035090.1-201ENST00000454835 332 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AC090602.1-201ENST00000469695 252 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFRAP16234 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFRAP16234 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFRAP16234 AC090022.1-201ENST00000546569 311 ntBASIC5.64□□□□□ -1.51
PDGFRAP16234 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms