Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC006210.2-201ENST00000367074 1545 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.66□□□□□ -1.66
FREM3P0C091 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 GTF2IP5-201ENST00000414608 731 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 RPS26P13-201ENST00000419030 330 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 DDX39BP1-205ENST00000422507 192 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.66□□□□□ -1.66
FREM3P0C091 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.66□□□□□ -1.66
FREM3P0C091 RBMY2TP-201ENST00000451162 947 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC092324.1-201ENST00000468671 324 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 IGBP1P4-201ENST00000503202 879 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.66□□□□□ -1.66
FREM3P0C091 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.66□□□□□ -1.66
FREM3P0C091 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FREM3P0C091 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FREM3P0C091 MIR4691-201ENST00000583764 85 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC011447.4-201ENST00000587562 111 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC091932.2-201ENST00000623014 291 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 AC053481.2-202ENST00000582394 1500 ntBASIC4.66□□□□□ -1.66
FREM3P0C091 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FREM3P0C091 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.65□□□□□ -1.66
FREM3P0C091 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
FREM3P0C091 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 AC063976.2-201ENST00000425667 3556 ntBASIC4.65□□□□□ -1.66
FREM3P0C091 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
FREM3P0C091 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.65□□□□□ -1.66
FREM3P0C091 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
FREM3P0C091 RNA5SP428-201ENST00000365129 132 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 RNU4-2-201ENST00000365668 141 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.65□□□□□ -1.67
FREM3P0C091 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.65□□□□□ -1.67
FREM3P0C091 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 MRPS21P2-201ENST00000424704 264 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.65□□□□□ -1.67
FREM3P0C091 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.65□□□□□ -1.67
FREM3P0C091 AC016559.2-201ENST00000510759 359 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 AP000676.2-201ENST00000529711 301 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.65□□□□□ -1.67
FREM3P0C091 AC044860.2-201ENST00000561005 179 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 AL022394.1-201ENST00000606979 292 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 MIR6839-201ENST00000620425 113 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 AC019206.1-201ENST00000621938 425 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.65□□□□□ -1.67
FREM3P0C091 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.65□□□□□ -1.67
FREM3P0C091 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
FREM3P0C091 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.65□□□□□ -1.67
FREM3P0C091 AC004817.4-201ENST00000602396 3625 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
FREM3P0C091 BX284613.1-201ENST00000452221 1641 ntBASIC4.65□□□□□ -1.67
FREM3P0C091 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FREM3P0C091 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.65□□□□□ -1.67
FREM3P0C091 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
FREM3P0C091 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.64□□□□□ -1.67
FREM3P0C091 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.64□□□□□ -1.67
FREM3P0C091 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FREM3P0C091 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FREM3P0C091 RNA5SP241-201ENST00000391326 114 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FREM3P0C091 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.64□□□□□ -1.67
FREM3P0C091 AL590762.4-201ENST00000425885 253 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 AC090018.1-201ENST00000434369 367 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.64□□□□□ -1.67
FREM3P0C091 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.64□□□□□ -1.67
FREM3P0C091 BX842559.2-201ENST00000451418 605 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 COX6B1P2-201ENST00000489624 230 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 NPM1P28-201ENST00000492269 840 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.64□□□□□ -1.67
FREM3P0C091 AC098976.1-201ENST00000513014 541 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.64□□□□□ -1.67
FREM3P0C091 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.64□□□□□ -1.67
FREM3P0C091 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.64□□□□□ -1.67
FREM3P0C091 MIR4660-201ENST00000583549 74 ntBASIC4.64□□□□□ -1.67
FREM3P0C091 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
FREM3P0C091 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.64□□□□□ -1.67
FREM3P0C091 AC118658.2-201ENST00000618697 459 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms