Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 PROS2P-201ENST00000474651 1951 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 RNA5SP183-201ENST00000362452 119 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 RNA5SP234-201ENST00000363916 119 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 RPL7L1P9-201ENST00000431298 745 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 CYCSP12-201ENST00000437729 300 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXD4P09016 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXD4P09016 OTX2P1-201ENST00000450956 354 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXD4P09016 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 RN7SL188P-201ENST00000469842 285 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 DUTP1-201ENST00000493631 470 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 RN7SL591P-201ENST00000496150 292 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC008953.1-201ENST00000497334 318 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 AC147055.3-201ENST00000510547 851 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 MTND2P31-201ENST00000512602 616 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXD4P09016 OR4A46P-201ENST00000527255 933 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 PMS2P3-207ENST00000529061 717 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 EIF4A2P5-201ENST00000529914 499 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXD4P09016 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXD4P09016 EIF1AXP2-201ENST00000555940 413 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXD4P09016 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXD4P09016 MIR6133-201ENST00000617057 108 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 AC243960.7-201ENST00000623532 707 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 MT-RNR2-201ENST00000387347 1559 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 ZNF733P-202ENST00000444809 1573 ntBASIC4.99□□□□□ -1.61
HOXD4P09016 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXD4P09016 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXD4P09016 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXD4P09016 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXD4P09016 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXD4P09016 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD4P09016 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD4P09016 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD4P09016 AC005294.1-201ENST00000355509 281 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXD4P09016 AC005042.1-201ENST00000393397 800 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 RN7SKP125-201ENST00000410481 302 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 AC211486.3-201ENST00000412694 621 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 CBX1P3-201ENST00000413296 527 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 RPL35AP24-201ENST00000413846 330 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 OR13Z1P-201ENST00000416141 834 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD4P09016 UBE2V2P1-201ENST00000434717 398 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 AC097523.2-201ENST00000435551 652 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 OR6D1P-201ENST00000436165 939 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 AC105399.1-202ENST00000447303 205 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 RPS23P9-201ENST00000448848 438 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXD4P09016 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXD4P09016 RPS7P6-201ENST00000485777 579 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 RPL15P21-201ENST00000495592 567 ntBASIC4.98□□□□□ -1.61
HOXD4P09016 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXD4P09016 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXD4P09016 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXD4P09016 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXD4P09016 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms