Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RETP07949 MTCO1P46-201ENST00000451639 1491 ntBASIC5.5□□□□□ -1.53
RETP07949 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 AP004607.3-201ENST00000530354 3915 ntBASIC5.5□□□□□ -1.53
RETP07949 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.5□□□□□ -1.53
RETP07949 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RETP07949 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RETP07949 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RETP07949 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RETP07949 MIR133B-201ENST00000362210 119 ntBASIC5.49□□□□□ -1.53
RETP07949 SNORA17.1-201ENST00000362945 126 ntBASIC5.49□□□□□ -1.53
RETP07949 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RETP07949 SNORA51.8-201ENST00000384234 132 ntBASIC5.49□□□□□ -1.53
RETP07949 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.49□□□□□ -1.53
RETP07949 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.49□□□□□ -1.53
RETP07949 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.49□□□□□ -1.53
RETP07949 OR10T1P-201ENST00000424327 947 ntBASIC5.49□□□□□ -1.53
RETP07949 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.49□□□□□ -1.53
RETP07949 RPL31P44-201ENST00000447680 377 ntBASIC5.49□□□□□ -1.53
RETP07949 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.49□□□□□ -1.53
RETP07949 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.49□□□□□ -1.53
RETP07949 OR5AZ1P-201ENST00000527448 943 ntBASIC5.49□□□□□ -1.53
RETP07949 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.49□□□□□ -1.53
RETP07949 BNIP3P1-201ENST00000547295 580 ntBASIC5.49□□□□□ -1.53
RETP07949 AL390334.1-201ENST00000556395 450 ntBASIC5.49□□□□□ -1.53
RETP07949 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.49□□□□□ -1.53
RETP07949 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.49□□□□□ -1.53
RETP07949 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.49□□□□□ -1.53
RETP07949 AC106730.2-201ENST00000566641 540 ntBASIC5.49□□□□□ -1.53
RETP07949 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.49□□□□□ -1.53
RETP07949 AC011447.4-201ENST00000587562 111 ntBASIC5.49□□□□□ -1.53
RETP07949 AC060766.1-201ENST00000590824 627 ntBASIC5.49□□□□□ -1.53
RETP07949 RNU6-84P-201ENST00000607737 102 ntBASIC5.49□□□□□ -1.53
RETP07949 AC138965.3-201ENST00000623875 498 ntBASIC5.49□□□□□ -1.53
RETP07949 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RETP07949 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RETP07949 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RETP07949 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RETP07949 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RETP07949 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RETP07949 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RETP07949 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RETP07949 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 SOCS5P3-201ENST00000425115 1576 ntBASIC5.48□□□□□ -1.53
RETP07949 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RETP07949 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 RN7SKP145-201ENST00000363291 303 ntBASIC5.48□□□□□ -1.53
RETP07949 RNU1-149P-201ENST00000390870 161 ntBASIC5.48□□□□□ -1.53
RETP07949 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 COX6CP17-201ENST00000421389 185 ntBASIC5.48□□□□□ -1.53
RETP07949 AC004129.2-201ENST00000457229 287 ntBASIC5.48□□□□□ -1.53
RETP07949 RN7SL188P-201ENST00000469842 285 ntBASIC5.48□□□□□ -1.53
RETP07949 NDUFA5P9-201ENST00000472609 340 ntBASIC5.48□□□□□ -1.53
RETP07949 AC090114.3-201ENST00000479267 829 ntBASIC5.48□□□□□ -1.53
RETP07949 AC138409.2-202ENST00000507274 458 ntBASIC5.48□□□□□ -1.53
RETP07949 AC105384.2-201ENST00000508433 640 ntBASIC5.48□□□□□ -1.53
RETP07949 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.48□□□□□ -1.53
RETP07949 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RETP07949 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.48□□□□□ -1.53
RETP07949 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 AC087783.2-201ENST00000605070 562 ntBASIC5.48□□□□□ -1.53
RETP07949 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.48□□□□□ -1.53
RETP07949 AC025574.2-201ENST00000615621 514 ntBASIC5.48□□□□□ -1.53
RETP07949 AC090527.3-201ENST00000619041 548 ntBASIC5.48□□□□□ -1.53
RETP07949 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RETP07949 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
RETP07949 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RETP07949 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.48□□□□□ -1.53
RETP07949 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RETP07949 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
RETP07949 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RETP07949 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RETP07949 CDY11P-201ENST00000447168 1651 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms