Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.67□□□□□ -1.34
COL5A2P05997 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL5A2P05997 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL5A2P05997 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL5A2P05997 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.67□□□□□ -1.34
COL5A2P05997 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL5A2P05997 AL731532.1-201ENST00000623972 4236 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 SNORA2.3-201ENST00000383920 135 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 MIR129-1-201ENST00000384972 72 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 ATP5HP3-201ENST00000396994 486 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 MIR298-201ENST00000401212 88 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 RNU4-25P-201ENST00000410569 230 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AC234779.1-201ENST00000425910 285 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 RPL23AP1-201ENST00000428990 471 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 CEACAMP6-201ENST00000452007 574 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.66□□□□□ -1.34
COL5A2P05997 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.66□□□□□ -1.34
COL5A2P05997 AC012339.2-201ENST00000523996 453 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AP003080.1-202ENST00000526526 915 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.66□□□□□ -1.34
COL5A2P05997 AC103792.1-201ENST00000603591 919 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AL356608.1-201ENST00000610034 820 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.66□□□□□ -1.34
COL5A2P05997 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL5A2P05997 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.66□□□□□ -1.34
COL5A2P05997 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL5A2P05997 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
COL5A2P05997 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.66□□□□□ -1.34
COL5A2P05997 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.66□□□□□ -1.34
COL5A2P05997 AL136116.2-201ENST00000404020 785 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 RN7SKP106-201ENST00000410832 272 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.66□□□□□ -1.34
COL5A2P05997 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.66□□□□□ -1.34
COL5A2P05997 AK3P4-201ENST00000504283 583 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.66□□□□□ -1.34
COL5A2P05997 AC098976.1-201ENST00000513014 541 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 RN7SKP92-201ENST00000517266 244 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AC022360.1-201ENST00000521058 340 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL5A2P05997 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.66□□□□□ -1.34
COL5A2P05997 MIR4675-201ENST00000577898 77 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.66□□□□□ -1.34
COL5A2P05997 AL121873.1-201ENST00000616013 524 ntBASIC6.66□□□□□ -1.34
COL5A2P05997 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.66□□□□□ -1.34
COL5A2P05997 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL5A2P05997 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.65□□□□□ -1.34
COL5A2P05997 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL5A2P05997 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL5A2P05997 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.65□□□□□ -1.34
COL5A2P05997 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL5A2P05997 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.65□□□□□ -1.35
COL5A2P05997 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL5A2P05997 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL5A2P05997 OR4K15-201ENST00000305051 1216 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 U3.30-201ENST00000391308 210 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL5A2P05997 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.65□□□□□ -1.35
COL5A2P05997 RPL23AP56-201ENST00000460778 453 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 AC083829.1-201ENST00000503756 657 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 AC025674.1-201ENST00000507074 324 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 ENPP7P9-201ENST00000514456 627 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 AC079064.1-201ENST00000528365 362 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.65□□□□□ -1.35
COL5A2P05997 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.65□□□□□ -1.35
COL5A2P05997 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.65□□□□□ -1.35
COL5A2P05997 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.65□□□□□ -1.35
COL5A2P05997 MIR6853-201ENST00000619642 74 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 AC068724.3-201ENST00000625906 87 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
COL5A2P05997 KYNUP3-201ENST00000574386 1341 ntBASIC6.65□□□□□ -1.35
COL5A2P05997 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.65□□□□□ -1.35
COL5A2P05997 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
COL5A2P05997 AC107980.1-201ENST00000558671 3355 ntBASIC6.64□□□□□ -1.35
COL5A2P05997 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.64□□□□□ -1.35
COL5A2P05997 AC091046.3-201ENST00000631455 1574 ntBASIC6.64□□□□□ -1.35
COL5A2P05997 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL5A2P05997 AL137100.1-201ENST00000556703 1620 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms