Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.06□□□□□ -1.44
COL4A1P02462 RPL32P3-201ENST00000359025 275 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 RNU2-50P-201ENST00000410494 143 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 BX510359.2-201ENST00000417920 305 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 AC009238.2-201ENST00000431026 355 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 NUTF2P7-201ENST00000453086 375 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 RN7SL244P-201ENST00000493405 297 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 AC022360.1-201ENST00000521058 340 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A1P02462 ATP5J2P6-201ENST00000565203 266 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 AC073091.2-201ENST00000603205 907 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 MIR6853-201ENST00000619642 74 ntBASIC6.06□□□□□ -1.44
COL4A1P02462 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL4A1P02462 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
COL4A1P02462 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A1P02462 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A1P02462 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL4A1P02462 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 RNA5SP241-201ENST00000391326 114 ntBASIC6.05□□□□□ -1.44
COL4A1P02462 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A1P02462 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.05□□□□□ -1.44
COL4A1P02462 AC073052.1-201ENST00000440417 714 ntBASIC6.05□□□□□ -1.44
COL4A1P02462 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.05□□□□□ -1.44
COL4A1P02462 SLC25A18P1-201ENST00000449385 454 ntBASIC6.05□□□□□ -1.44
COL4A1P02462 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 HPRT1P1-201ENST00000509498 657 ntBASIC6.05□□□□□ -1.44
COL4A1P02462 AC034205.1-201ENST00000520621 638 ntBASIC6.05□□□□□ -1.44
COL4A1P02462 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.05□□□□□ -1.44
COL4A1P02462 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.05□□□□□ -1.44
COL4A1P02462 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A1P02462 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A1P02462 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
COL4A1P02462 NCLP2-201ENST00000416078 1462 ntBASIC6.05□□□□□ -1.44
COL4A1P02462 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A1P02462 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL4A1P02462 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 ELOCP19-201ENST00000411919 318 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 AC016772.1-201ENST00000444170 1261 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A1P02462 RN7SL197P-201ENST00000466981 299 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 NDUFA5P9-201ENST00000472609 340 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 STRADBP1-201ENST00000478954 1281 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AC013356.1-201ENST00000489027 564 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AP003080.1-202ENST00000526526 915 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 RN7SL802P-201ENST00000577858 299 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AP001521.2-201ENST00000608772 546 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AC026367.3-201ENST00000619032 590 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 AC019206.1-201ENST00000621938 425 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL4A1P02462 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
COL4A1P02462 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A1P02462 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 AP005432.1-201ENST00000580891 3485 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
COL4A1P02462 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
COL4A1P02462 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms